Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs17069665
rs17069665
0.010 GeneticVariation BEFREE The effects of rs17</span>069665 on ALL risk were more predominant in males and children < 10 years, and patients with lower rates of platelet or neutrophil. 31691337

2020

dbSNP: rs9400241
rs9400241
0.010 GeneticVariation BEFREE We found rs17069665 related to the increased ALL risk (OR = 1.76; 95% CI = 1.02-3.04), rs9400241 related to decreased ALL risk (OR = 0.80; 95% CI = 0.64-0.99). 31691337

2020

dbSNP: rs111978267
rs111978267
0.010 GeneticVariation BEFREE We examined whether the common IKZF1 polymorphisms rs4132601 T/G and rs111978267 A/G are associated with ALL among a Tunisian pediatric cohort. 31604453

2019

dbSNP: rs2043211
rs2043211
0.010 GeneticVariation BEFREE In conclusion, NF-κB-94 ins/del ATTG and CARD8 (rs2043211) genotypes might serve as novel biomarkers and potential targets for ALL. 31428046

2019

dbSNP: rs2413739
rs2413739
0.010 GeneticVariation BEFREE The aim of the study was to validate the impact of the single-nucleotide polymorphism rs2413739 (T > C) in the PACSIN2 gene on thiopurines pharmacological parameters and clinical response in an Italian cohort of pediatric patients with acute lymphoblastic leukemia (ALL) and inflammatory bowel disease (IBD). 31792371

2019

dbSNP: rs3758149
rs3758149
GGH
0.010 GeneticVariation BEFREE The present study aimed to investigate the role of rs3758149 C/T polymorphism and transcription factors in the regulation of <i>GGH</i> expression in human acute lymphoblastic leukemia (ALL) CEM/C1 cells. 31739835

2019

dbSNP: rs4846049
rs4846049
0.010 GeneticVariation BEFREE MTHFR rs4846049 polymorphism may be associated with increased risk of childhood with ALL and MTHFR mRNA expression. 31737664

2019

dbSNP: rs543412
rs543412
0.010 GeneticVariation BEFREE Our study suggested that there was significant association between the polymorphisms in miR-100 (rs543412) and decreased susceptibility to childhood ALL. 30848099

2019

dbSNP: rs57095329
rs57095329
0.010 GeneticVariation BEFREE Haplotype analysis indicated a combination of allele A of rs57095329 and allele G of rs2910164 could represent a risk haplotype and an allele combination of G of rs57095329 and G of rs2910164 could represent a protective haplotype for ALL. 30576465

2019

dbSNP: rs1138272
rs1138272
0.010 GeneticVariation BEFREE Conclusions Our results have shown that NR3C1 rs6198 variant and GSTP1 rs1695-rs1138272 haplotype are the most promising pharmacogenomic markers of GC response in ALL patients. 30210047

2018

dbSNP: rs1188383936
rs1188383936
F2
0.010 GeneticVariation BEFREE Samples collected prior to the start of ALL therapy were evaluated for genetic and acquired PDs (proteins C and S, antithrombin, procoagulant factors VIII (FVIII:C), IX, XI and von Willebrand factor antigen levels, gene polymorphisms of factor V G1691A, prothrombin gene G20210A and methylene tetrahydrofolate reductase C677T, anticardiolipin antibodies, fasting lipoprotein(a), and homocysteine). 29334169

2018

dbSNP: rs12402181
rs12402181
0.010 GeneticVariation BEFREE SNPs rs12402181 in miR-3117 and rs62571442 in miR-3689d2 were associated with ALL risk in both cohorts, possibly through their effect on MAPK signalling pathway. 29796161

2018

dbSNP: rs153109
rs153109
0.010 GeneticVariation BEFREE In conclusion, the association of IL-27 rs153109 and rs17855750 polymorphisms with risk of ALL development and their impact on EFS suggested an important role for this cytokine in biology and response to ALL therapy. 28828696

2018

dbSNP: rs17855750
rs17855750
0.010 GeneticVariation BEFREE In conclusion, the association of IL-27 rs153109 and rs17855750 polymorphisms with risk of ALL development and their impact on EFS suggested an important role for this cytokine in biology and response to ALL therapy. 28828696

2018

dbSNP: rs17863783
rs17863783
0.010 GeneticVariation BEFREE Currently, pharmacogenomic testing of all childhood cancer patients with an indication for doxorubicin or daunorubicin therapy for RARG rs2229774, SLC28A3 rs7853758, and UGT1A6*4 rs17863783 variants is recommended. 29713898

2018

dbSNP: rs1799796
rs1799796
0.010 GeneticVariation BEFREE <i>XRCC3</i> rs1799794, rs45603942, rs1799796, and rs861530 were not significantly associated with the risk of childhood ALL in the Taiwanese population. 30532590

2018

dbSNP: rs2069762
rs2069762
IL2
0.010 GeneticVariation BEFREE The purpose of this work was to explore the association of IFNG +874 A/T (rs2430561) and IL2 -330 G/T (rs2069762) SNPs with ALL susceptibility and/or protection in 488 Mexican Mestizos patients, as compared to 950 Mexican Mestizo healthy controls. 30212785

2018

dbSNP: rs2229774
rs2229774
0.010 GeneticVariation BEFREE Currently, pharmacogenomic testing of all childhood cancer patients with an indication for doxorubicin or daunorubicin therapy for RARG rs2229774, SLC28A3 rs7853758, and UGT1A6*4 rs17863783 variants is recommended. 29713898

2018

dbSNP: rs2430561
rs2430561
0.010 GeneticVariation BEFREE The purpose of this work was to explore the association of IFNG +874 A/T (rs2430561) and IL2 -330 G/T (rs2069762) SNPs with ALL susceptibility and/or protection in 488 Mexican Mestizos patients, as compared to 950 Mexican Mestizo healthy controls. 30212785

2018

dbSNP: rs2853542
rs2853542
0.010 GeneticVariation BEFREE We analyzed the presence of a 28-base pair tandem repeat (rs34743033; 2R3R), a single nucleotide polymorphism present within the 28-base pair repeat on the 3R allele (rs2853542; 3RG>C) and a 6-base pair deletion (rs15126436; TTAAAG) within the TYMS gene in germline DNA of 117 pediatric patients with ALL. 30222710

2018

dbSNP: rs34009635
rs34009635
0.010 GeneticVariation BEFREE Our findings suggest that the polymorphisms at MMP-8 -799C/T, Val436Ala and Lys460Thr may not play a major role in determining the personal susceptibility to childhood ALL in Taiwan. 29102926

2018

dbSNP: rs35866072
rs35866072
0.010 GeneticVariation BEFREE Our findings suggest that the polymorphisms at MMP-8 -799C/T, Val436Ala and Lys460Thr may not play a major role in determining the personal susceptibility to childhood ALL in Taiwan. 29102926

2018

dbSNP: rs4149009
rs4149009
0.010 GeneticVariation BEFREE Genotyping for SLCO1A2 rs4149009 G > A in 141 children with ALL was performed using the Sequenom MassARRAY system. 29306656

2018

dbSNP: rs4646450
rs4646450
0.010 GeneticVariation BEFREE CYP3A5 rs4646450 TT was 17% among ALL cases with FS lower than 28, and 3% in ALL patients without pathological FS (p = 5.60E-03; OR = 6.94 (1.76-27.39)). 29970035

2018

dbSNP: rs6198
rs6198
0.010 GeneticVariation BEFREE Conclusions Our results have shown that NR3C1 rs6198 variant and GSTP1 rs1695-rs1138272 haplotype are the most promising pharmacogenomic markers of GC response in ALL patients. 30210047

2018