Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3746444
rs3746444
0.010 GeneticVariation BEFREE 35, 95% CI: 1.09-1.67), and rs3746444 was associated with liver cancer in the subgroup of cancer types. 23725137

2013

dbSNP: rs1800562
rs1800562
0.010 GeneticVariation BEFREE A diagnosis of liver cancer or cirrhosis is rare in the lifetime of individuals from this population who are homozygous for the C282Y mutation (2.5%; upper 95% confidence interval (CI) = 8%). 10673304

2000

dbSNP: rs1799945
rs1799945
0.010 GeneticVariation BEFREE A number of previous studies have demonstrated that the HFE H63D polymorphism is associated with increased risk of incidence multiple types of cancer, including colorectal cancer, breast cancer, liver cancer, pancreatic cancer, and gynecological malignant tumors. 26535689

2015

dbSNP: rs28929474
rs28929474
0.010 GeneticVariation BEFREE According to retrospective studies, up to 25% of those with homozygous ZZ (Glu 342 to Lys) AATD suffer from liver cirrhosis and/or liver cancer in late adulthood. 21617532

2011

dbSNP: rs28362491
rs28362491
0.010 GeneticVariation BEFREE After adjusted for potential confounding factors, rs28362491 ins/del or del/del genotypes were associated with higher risk of liver cancer with an adjusted OR 1.54 (95% CI 1.04 to 2.28). rs230496 AG and GG genotypes were also noted with higher risk of liver cancer with an adjusted OR 1.53 (95% CI 1.03 to 2.26). 24578542

2014

dbSNP: rs230496
rs230496
0.010 GeneticVariation BEFREE After adjusted for potential confounding factors, rs28362491 ins/del or del/del genotypes were associated with higher risk of liver cancer with an adjusted OR 1.54 (95% CI 1.04 to 2.28). rs230496 AG and GG genotypes were also noted with higher risk of liver cancer with an adjusted OR 1.53 (95% CI 1.03 to 2.26). 24578542

2014

dbSNP: rs1801133
rs1801133
0.020 GeneticVariation BEFREE After shrinkage and adjusting for potential confounding factors, we found positive associations between MTHFR rs1801133 and stomach cancer (any T versus C/C, SB odds-ratio [SBOR]: 1.79, 95% posterior limits: 1.18, 2.71) and liver cancer (SBOR: 1.51, 95% posterior limits: 0.98, 2.32). 25337902

2014

dbSNP: rs3787016
rs3787016
0.020 GeneticVariation BEFREE Although no significant association was found for rs3787016 with risk of liver or lung cancer, the further stratified analysis identified that rs3787016 contributed to liver cancer risk particularly for over than 60 years individuals who drink. 30291213

2018

dbSNP: rs16901979
rs16901979
0.010 GeneticVariation BEFREE Associations were observed between rs16901979 and upper aerodigestive tract cancer among never-smokers and between rs1447295 and liver cancer among ever-smokers. 18990762

2008

dbSNP: rs1447295
rs1447295
0.020 GeneticVariation BEFREE Associations were observed between rs16901979 and upper aerodigestive tract cancer among never-smokers and between rs1447295 and liver cancer among ever-smokers. 18990762

2008

dbSNP: rs5854292
rs5854292
0.010 GeneticVariation BEFREE Case-control studies assessing the relationship between TM6SF2 rs5854292 locus polymorphism and liver cancer were selected according to inclusion and exclusion criteria. 31752753

2019

dbSNP: rs187115
rs187115
0.010 GeneticVariation BEFREE Collectively, the CD44 rs187115 variant may be associated with the risk of cervical, lung, and liver cancer in the central Chinese population, and may be used as a potential biomarker for cancer predisposition in the Asian population, especially in the Chinese population. 30860617

2019

dbSNP: rs764555290
rs764555290
0.010 GeneticVariation BEFREE Further study on expression level and relevant functional significance enables us to identify and conclude the following four novel variants, viz., c.416T>C (p.Phe139Ser) in SORD, c.1048_1049delGCinsCG (p.Ala350Arg) in KRT6A, c.1159G>T (p.Gly387Cys) in SVEP1, and c.430G>C (p.Gly144Arg) in MRPL38 as a critical genetic factor for liver cancer. 31272500

2019

dbSNP: rs230525
rs230525
0.010 GeneticVariation BEFREE Haplotype analysis indicated that carriers of the NFKB1 GA and AA (rs230525-rs230530) haplotypes had higher risk of liver cancer under an additive model. 24578542

2014

dbSNP: rs230530
rs230530
0.010 GeneticVariation BEFREE Haplotype analysis indicated that carriers of the NFKB1 GA and AA (rs230525-rs230530) haplotypes had higher risk of liver cancer under an additive model. 24578542

2014

dbSNP: rs1051861187
rs1051861187
0.010 GeneticVariation BEFREE Here, we report the first characterisation at the protein level of six ABCB4 variants (D243A, K435T, G535D, I490T, R545C, and S978P) previously found in patients with inflammatory liver diseases or liver cancer. 28220208

2017

dbSNP: rs3811741
rs3811741
0.010 GeneticVariation BEFREE Herein, we found a significant association between rs3811741, located in the PLK4 intron, and liver cancer</span> risk (OR = 1.26, P = 9.81 × 10<sup>-5</sup> ). 31489978

2019

dbSNP: rs6983267
rs6983267
0.020 GeneticVariation BEFREE Heterogeneity was observed (P(heterogeneity) = 0.029) with rs6983267 and liver cancer, with positive association in the dominant model among those with a family history of cancer and positive association in the recessive model among those without a family history of cancer. 24030569

2014

dbSNP: rs763569821
rs763569821
0.010 GeneticVariation BEFREE However, the frequency of primary liver carcinoma (PLC) with biliary differentiation, such as cholangiocarcinoma (CC) and combined hepatocholangiocarcinoma (CHCC), in GH remains unclear We analyzed the histologic type of 20 PLCs occurring in the background of GH; all patients were homozygotic for the C282Y mutation. 11710692

2001

dbSNP: rs1447295
rs1447295
0.020 GeneticVariation BEFREE In a dominant model, among those with a family history of cancer, rs1447295 was positively associated with liver cancer (OR(adj) 2.80; 95% CI 1.15-6.80). 24030569

2014

dbSNP: rs1801394
rs1801394
0.010 GeneticVariation BEFREE In addition, we detected potential heterogeneity across alcohol drinking status for ORs relating MTRR rs1801394 to esophageal (posterior homogeneity P = 0.005) and stomach cancer (posterior homogeneity P = 0.004), and ORs relating MTR rs1805087 to liver cancer (posterior homogeneity P = 0.021). 25337902

2014

dbSNP: rs1805087
rs1805087
MTR
0.010 GeneticVariation BEFREE In addition, we detected potential heterogeneity across alcohol drinking status for ORs relating MTRR rs1801394 to esophageal (posterior homogeneity P = 0.005) and stomach cancer (posterior homogeneity P = 0.004), and ORs relating MTR rs1805087 to liver cancer (posterior homogeneity P = 0.021). 25337902

2014

dbSNP: rs4444903
rs4444903
EGF
0.020 GeneticVariation BEFREE In conclusion, the current meta-analysis suggests that the G variant of the rs4444903 polymorphism may increase</span> the risk of liver cancer. 25299191

2014

dbSNP: rs2853669
rs2853669
0.010 GeneticVariation BEFREE In conclusion, we demonstrate a substantial role for the rs2853669 in HCC with TERT promoter mutation, which suggests that the combination of the rs2853669 and the mutation indicate poor prognoses in liver cancer. 26575952

2016

dbSNP: rs843720
rs843720
0.020 GeneticVariation BEFREE In the allele model, ACYP2 rs843720 was protection against the occurrence of cirrhosis developed into liver cancer (OR = 0.76, 95% CI: 0.58-0.99, p = 0.04). 31124313

2019