Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs763569821
rs763569821
0.010 GeneticVariation BEFREE However, the frequency of primary liver carcinoma (PLC) with biliary differentiation, such as cholangiocarcinoma (CC) and combined hepatocholangiocarcinoma (CHCC), in GH remains unclear We analyzed the histologic type of 20 PLCs occurring in the background of GH; all patients were homozygotic for the C282Y mutation. 11710692

2001

dbSNP: rs3746444
rs3746444
0.010 GeneticVariation BEFREE 35, 95% CI: 1.09-1.67), and rs3746444 was associated with liver cancer in the subgroup of cancer types. 23725137

2013

dbSNP: rs230496
rs230496
0.010 GeneticVariation BEFREE After adjusted for potential confounding factors, rs28362491 ins/del or del/del genotypes were associated with higher risk of liver cancer with an adjusted OR 1.54 (95% CI 1.04 to 2.28). rs230496 AG and GG genotypes were also noted with higher risk of liver cancer with an adjusted OR 1.53 (95% CI 1.03 to 2.26). 24578542

2014

dbSNP: rs230525
rs230525
0.010 GeneticVariation BEFREE Haplotype analysis indicated that carriers of the NFKB1 GA and AA (rs230525-rs230530) haplotypes had higher risk of liver cancer under an additive model. 24578542

2014

dbSNP: rs230530
rs230530
0.010 GeneticVariation BEFREE Haplotype analysis indicated that carriers of the NFKB1 GA and AA (rs230525-rs230530) haplotypes had higher risk of liver cancer under an additive model. 24578542

2014

dbSNP: rs28362491
rs28362491
0.010 GeneticVariation BEFREE After adjusted for potential confounding factors, rs28362491 ins/del or del/del genotypes were associated with higher risk of liver cancer with an adjusted OR 1.54 (95% CI 1.04 to 2.28). rs230496 AG and GG genotypes were also noted with higher risk of liver cancer with an adjusted OR 1.53 (95% CI 1.03 to 2.26). 24578542

2014

dbSNP: rs16901979
rs16901979
0.010 GeneticVariation BEFREE Associations were observed between rs16901979 and upper aerodigestive tract cancer among never-smokers and between rs1447295 and liver cancer among ever-smokers. 18990762

2008

dbSNP: rs3811741
rs3811741
0.010 GeneticVariation BEFREE Herein, we found a significant association between rs3811741, located in the PLK4 intron, and liver cancer</span> risk (OR = 1.26, P = 9.81 × 10<sup>-5</sup> ). 31489978

2019

dbSNP: rs738409
rs738409
0.040 GeneticVariation BEFREE These patients were followed-up and screened for the risk of HCC, and the influence of rs738409 on the occurrence of liver cancer was assessed using the Kaplan-Meier method, then according to the multivariate Cox model. 23069476

2013

dbSNP: rs738409
rs738409
0.040 GeneticVariation BEFREE The PNPLA3 rs738409 148M/M genotype is a risk factor for liver cancer in alcoholic cirrhosis but shows no or weak association in hepatitis C cirrhosis. 22087248

2011

dbSNP: rs738409
rs738409
0.040 GeneticVariation BEFREE The GG genotype of PNPLA3 rs738409 and the bAt (CCA) haplotype -associated with an increased risk of chronic liver disease and progression towards liver cancer- were significantly more frequent among samples exhibiting maternal and paternal Native American haplogroups (63.7 % and 64.6 %), intermediate among admixed samples (45.1 % and 44.9 %; p = 0.03) and the lowest for Non-native American ancestry (30.1 % and 29.6 %; p = 0.001 and p = 0.0008). 26219465

2015

dbSNP: rs738409
rs738409
0.040 GeneticVariation BEFREE Variation at rs738409 was not associated with significant changes in resolution rate of hepatitis C. By contrast, M/M genotype, present at higher frequencies (22.8%) in HCC patients than in patients with chronic hepatitis C (8.5%, P = 0.004) or control individuals (9.1%, P = 0.005) was associated with a 3-fold increase of liver cancer risk. 24269995

2014

dbSNP: rs3787016
rs3787016
0.020 GeneticVariation BEFREE Although no significant association was found for rs3787016 with risk of liver or lung cancer, the further stratified analysis identified that rs3787016 contributed to liver cancer risk particularly for over than 60 years individuals who drink. 30291213

2018

dbSNP: rs3787016
rs3787016
0.020 GeneticVariation BEFREE The rs3787016 polymorphism, in polymerase II polypeptide E (POLR2E), was previously identified as being associated with the risk for prostate cancer, esophageal cancer, breast cancer, papillary thyroid carcinoma and liver cancer, suggesting that rs3787016 may server as a common genetic factor to affect individual susceptibility to cancer. 30846411

2019

dbSNP: rs6983267
rs6983267
0.020 GeneticVariation BEFREE We also observed a suggestive association between rs6983267 and liver cancer (ORadj, 1.51; 95% CI, 0.99-2.31). 18990762

2008

dbSNP: rs6983267
rs6983267
0.020 GeneticVariation BEFREE Heterogeneity was observed (P(heterogeneity) = 0.029) with rs6983267 and liver cancer, with positive association in the dominant model among those with a family history of cancer and positive association in the recessive model among those without a family history of cancer. 24030569

2014

dbSNP: rs1234220
rs1234220
0.010 GeneticVariation BEFREE TC genotype and C allele of rs1234220 polymorphism showed much more frequently in cases than in controls, reflecting that the TC genotype and the C allele may be linked to the increased risk of liver cancer (OR=2.225, 95% CI=1.178-4.204; OR=1.941, 95% CI=1.124-3.351). 26823866

2015

dbSNP: rs2299939
rs2299939
0.010 GeneticVariation BEFREE To find out if there are any relationship between three single nucleotide polymorphisms (SNPs) of phosphatase and tensin homolog (PTEN) gene (rs1234213, rs1234220, and rs2299939) and the susceptibility of liver cancer. 26823866

2015

dbSNP: rs745501336
rs745501336
0.010 GeneticVariation BEFREE Sanger DNA sequencing confirmed a mutation (c: 128810106C > T, p: A158T) occurred in one allele of Rab43 gene from the proband, that heterozygous mutation also was verified in the genome of the proband's deceased father with liver cancer, but not in his healthy mother and sister. 31226964

2019

dbSNP: rs28929474
rs28929474
0.010 GeneticVariation BEFREE According to retrospective studies, up to 25% of those with homozygous ZZ (Glu 342 to Lys) AATD suffer from liver cirrhosis and/or liver cancer in late adulthood. 21617532

2011

dbSNP: rs2296651
rs2296651
0.010 GeneticVariation BEFREE The S267F variant for the HBV cell-entry receptor NTCP was associated with increased resistance to HBV infection and decreased risk for cirrhosis and liver cancer among those with chronic HBV infection. 29905807

2018

dbSNP: rs769031989
rs769031989
0.010 GeneticVariation BEFREE We developed liver cancer cell lines that endogenously expressed a mutant form of TP53 (R249S) or overexpressed mutant forms of STAT3 (D170Y, K348E, and Y640F) or JAK1 (S703I and L910P) and tested the abilities of pharmacologic agents to reduce activity. 31560893

2019

dbSNP: rs2853669
rs2853669
0.010 GeneticVariation BEFREE In conclusion, we demonstrate a substantial role for the rs2853669 in HCC with TERT promoter mutation, which suggests that the combination of the rs2853669 and the mutation indicate poor prognoses in liver cancer. 26575952

2016

dbSNP: rs2241715
rs2241715
0.010 GeneticVariation BEFREE The risk factors for familial aggregation of liver cancer</span> in Guangxi were determined, from high to low, to be: drinking sugared beverages > alcohol consumption > HBV DNA-positive > rs1800469 TT homozygous genotype > rs2241715 TT homozygous genotype. 26345741

2015

dbSNP: rs1800469
rs1800469
0.010 GeneticVariation BEFREE The risk factors for familial aggregation of liver cancer in Guangxi were determined, from high to low, to be: drinking sugared beverages > alcohol consumption > HBV DNA-positive > rs1800469 TT homozygous genotype > rs2241715 TT homozygous genotype. 26345741

2015