Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE Epithelioid GBM with BRAF V600E mutation can be considered a good treatment indication for precision medicine, and this patient-derived cell line should be useful for prediction of the tumor response and clarification of its biological characteristics. 31345255

2019

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE BRAF V600E mutation and BRAF VE1 immunoexpression profiles in different types of glioblastoma. 30013630

2018

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE Here, we describe a case of systemic metastases of a clonal subpopulation of BRAF V600E mutated glioblastoma in a patient previously treated with surgery, radiation, temozolomide and bevacizumab. 29744614

2018

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE These findings suggest that epithelioid GBM may arise from a PXA with a BRAF V600E mutation. 24894018

2014

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE BRAF V600E mutational analyses should be performed on E-GBMs, particularly in all pediatric and young-aged adults, given the potential for BRAF inhibitor therapy in this subset of GBM patients. 23552385

2013

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE An institutional cohort of 105 brain tumors (51 dysembryoplastic neuroepithelial tumors (DNTs), 14 subependymal giant cell astrocytomas (SEGAs), 12 glioblastoma with neuronal marker expression (GBM-N), and 28 pleomorphic xanthoastrocytomas (PXAs)) from 100 patients were investigated for the presence of BRAF(V600E) by direct sequencing. 25346165

2015

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE This case suggests that the BRAF V600E mutation may be involved in the malignant transformation to glioblastoma. 26404554

2016

dbSNP: rs113488022
rs113488022
0.090 GeneticVariation BEFREE Epithelioid glioblastoma is a recognized glioblastoma variant, recently added to the World Health Organization brain tumor classification, with similar prognosis as the classic variant and B-Raf V600E mutations in 50% of the cases. 31258848

2019

dbSNP: rs1135401891
rs1135401891
0.010 GeneticVariation BEFREE Here, we report on the expression of wild-type and L441P variants of human PO in a U87 glioblastoma human cell line in an attempt to assess their effect on glutamate metabolism. 29694413

2018

dbSNP: rs1136410
rs1136410
0.010 GeneticVariation BEFREE The C allele of the PARP1 rs1136410 variant was associated with a 20% reduction in risk for glioblastoma multiforme (odds ratio(CT or CC), 0.80; 95% confidence interval, 0.67-0.95). 19318434

2009

dbSNP: rs1138272
rs1138272
0.010 GeneticVariation BEFREE However, the significant risk elevation is present between GSTP1 A114V genotype and other histopathologic glioma except GBM. 23079710

2013

dbSNP: rs11515
rs11515
0.010 GeneticVariation BEFREE The analysis of CDKN2A showed NDTMM GBMs had an increased minor allele frequency for the C500G (rs11515) polymorphism compared to those with telomerase and ALT positive GBMs (p = 0.002). 22046342

2011

dbSNP: rs11548193
rs11548193
0.010 GeneticVariation BEFREE Taken together, the MS and novel 3D structural data give us reason to further pursue BCAT2 T186R as a precision drug target in GBM.Graphical Abstract ᅟ. 28681360

2017

dbSNP: rs11554137
rs11554137
0.010 GeneticVariation BEFREE Clinical prognostic value of the isocitrate dehydrogenase 1 single-nucleotide polymorphism rs11554137 in glioblastoma. 29423539

2018

dbSNP: rs11558961
rs11558961
0.010 GeneticVariation BEFREE In conclusion, rs11558961 might influence the chemoresistance and progression of GBM cells via promoting the binding of miR-139, ultimately decrease the susceptibility of GBM. 29746255

2018

dbSNP: rs11571833
rs11571833
0.010 GeneticVariation BEFREE Although no single variant showed an association which was statistically significant at the genome-wide threshold a number represented promising associations - BRCA2:c.9976A>T, p.(Lys3326Ter), which has been shown to influence breast and lung cancer risk (odds ratio (OR)=2.3, P=4.00 × 10(-4) for glioblastoma (GBM)) and IDH2:c.782G>A, p.(Arg261His) (OR=3.21, P=7.67 × 10(-3), for non-GBM). 26264438

2016

dbSNP: rs1161136341
rs1161136341
0.010 GeneticVariation BEFREE The R132H mutation in isocitrate dehydrogenase 1 (IDH1<sup>R132H</sup>) is commonly observed and associated with better survival in glioblastoma multiforme (GBM), a malignant brain tumor. 31151327

2019

dbSNP: rs11615
rs11615
0.010 GeneticVariation BEFREE Furthermore, the haplotype containing the C allele of ERCC2 rs13181 polymorphism and the T allele of ERCC1 rs11615 polymorphism was significantly associated with a protective effect of developing glioblastoma (OR=0.34, 95% CI 0.16-0.71; P=0.004). 24325908

2014

dbSNP: rs11670188
rs11670188
0.010 GeneticVariation BEFREE We identified LIG4 rs7325927 and BTBD2 rs11670188 as predictors of STS in GBM and CCDC26 rs10464870 and rs891835, HMGA2 rs1563834, and RTEL1 rs2297440 as predictors of LTS. 20368557

2010

dbSNP: rs118101777
rs118101777
0.080 GeneticVariation BEFREE HMab-2 detected endogenous IDH1-R132H protein expressed in glioblastoma in immunohistochemical analysis. 26381180

2015

dbSNP: rs118101777
rs118101777
0.080 GeneticVariation BEFREE Although no single variant showed an association which was statistically significant at the genome-wide threshold a number represented promising associations - BRCA2:c.9976A>T, p.(Lys3326Ter), which has been shown to influence breast and lung cancer risk (odds ratio (OR)=2.3, P=4.00 × 10(-4) for glioblastoma (GBM)) and IDH2:c.782G>A, p.(Arg261His) (OR=3.21, P=7.67 × 10(-3), for non-GBM). 26264438

2016

dbSNP: rs118101777
rs118101777
0.080 GeneticVariation BEFREE We identified a small cohort of WHO grade II-III astrocytomas that harbored the IDH1 R132H mutation, as confirmed by both immunohistochemistry and molecular sequence analysis, which nonetheless had unexpectedly rapid recurrence and subsequent progression to glioblastoma. 28421459

2017

dbSNP: rs118101777
rs118101777
0.080 GeneticVariation BEFREE The prognostic value of IDH1 R132H mutation in GBM patients was verified. 24511544

2014

dbSNP: rs118101777
rs118101777
0.080 GeneticVariation BEFREE ATRX and IDH1-R132H immunohistochemistry with subsequent copy number analysis and IDH sequencing as a basis for an "integrated" diagnostic approach for adult astrocytoma, oligodendroglioma and glioblastoma. 25427834

2015

dbSNP: rs118101777
rs118101777
0.080 GeneticVariation BEFREE For this reason, it was suggested that immunohistochemistry against IDH1 R132H is sufficient to classify GBM as IDH wild-type in this age group. 31758617

2020