Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10168266
STAT4
0.776 0.400 2 191071078 intron variant C/T snv 0.19 8
rs10174238
STAT4
0.724 0.200 2 191108308 intron variant G/A snv 0.70 14
rs10181656
STAT4
0.763 0.360 2 191105153 intron variant G/C snv 0.79 9
rs10488631
TNPO3
0.742 0.280 7 128954129 upstream gene variant T/C snv 9.0E-02 13
rs10499194 0.752 0.400 6 137681500 intron variant C/T snv 0.24 10
rs1063320
HLA-G
0.752 0.360 6 29830972 3 prime UTR variant C/G;T snv 12
rs1077393
BAG6
0.882 0.200 6 31642752 non coding transcript exon variant A/G snv 0.44 3
rs10818488
C5-OT1
0.776 0.360 9 120942809 regulatory region variant A/G snv 0.51 8
rs10840759
CLEC4A
0.882 0.200 12 8138610 intron variant C/T snv 0.28 3
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10954213
IRF5
0.752 0.200 7 128949373 3 prime UTR variant G/A snv 0.58 11
rs10954214
IRF5
0.851 0.160 7 128949579 3 prime UTR variant C/T snv 0.64 4
rs11066301
PTPN11
0.827 0.200 12 112433568 intron variant A/G snv 0.30 12
rs11085725
TYK2
0.851 0.160 19 10351837 intron variant C/T snv 0.24 4
rs11203203
UBASH3A
0.807 0.240 21 42416077 intron variant G/A snv 0.28 9
rs112846137 0.851 0.160 3 160595133 intergenic variant G/T snv 5.3E-02 4
rs1131012
PECAM1
0.763 0.280 17 64350416 missense variant T/C snv 0.38 10
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1150753
TNXB
0.925 0.120 6 32092090 intron variant A/G snv 6.3E-02 2
rs11568821
LOC105373977 ; PDCD1
0.827 0.200 2 241851760 intron variant C/G;T snv 10
rs117026326
LOC101926943 ; GTF2I
0.752 0.440 7 74711703 intron variant C/T snv 1.3E-02 10
rs11889341
STAT4
0.732 0.480 2 191079016 intron variant C/T snv 0.21 12
rs1217393
AP4B1-AS1
0.851 0.160 1 113891324 intron variant G/A snv 0.42 4
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs1234315
TNFSF4
0.807 0.400 1 173209324 upstream gene variant C/T snv 0.57 6