Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10036748
TNIP1
0.752 0.360 5 151078585 intron variant C/A;T snv 11
rs1063320
HLA-G
0.752 0.360 6 29830972 3 prime UTR variant C/G;T snv 12
rs10774625
ATXN2
0.763 0.320 12 111472415 intron variant A/G snv 0.66 13
rs10917661
FCGR2B
0.882 0.160 1 161671427 stop gained C/T snv 2.8E-05 3
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs1707
HLA-G
0.925 0.120 6 29830833 3 prime UTR variant C/T snv 0.87 2
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs1800872
IL19 ; IL10
0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69 119
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs187238
IL18
0.602 0.680 11 112164265 intron variant C/A;G snv 48
rs1946518
IL18
0.602 0.760 11 112164735 intron variant T/G snv 0.60 46
rs2069705
IFNG-AS1 ; IFNG
0.695 0.440 12 68161231 intron variant G/A;C snv 19
rs2069718
IFNG ; IFNG-AS1
0.742 0.320 12 68156382 intron variant A/G;T snv 0.50 14
rs2187668
LOC107986589 ; HLA-DQA2 ; HLA-DQA1
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 20
rs2243250
IL4
0.570 0.760 5 132673462 upstream gene variant C/T snv 0.35 61
rs2254546 0.807 0.400 8 11486171 upstream gene variant A/G snv 0.83 6
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs2280964
CXCR3
0.882 0.200 X 71618204 intron variant C/A;G;T snv 3
rs2327832 0.790 0.320 6 137651931 intergenic variant A/G snv 0.16 10
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36 50
rs2670660
NLRP1
0.708 0.400 17 5615686 intron variant A/G snv 0.41 15