Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1707
HLA-G
0.925 0.120 6 29830833 3 prime UTR variant C/T snv 0.87 2
rs10917661
FCGR2B
0.882 0.160 1 161671427 stop gained C/T snv 2.8E-05 3
rs2280964
CXCR3
0.882 0.200 X 71618204 intron variant C/A;G;T snv 3
rs3129943
TSBP1-AS1 ; TSBP1
0.851 0.240 6 32370918 intron variant A/G snv 0.26 4
rs3129890 0.827 0.280 6 32446496 downstream gene variant T/A;C snv 5
rs2254546 0.807 0.400 8 11486171 upstream gene variant A/G snv 0.83 6
rs7192
HLA-DRA
0.827 0.200 6 32443869 missense variant T/G snv 0.64 0.61 7
rs2327832 0.790 0.320 6 137651931 intergenic variant A/G snv 0.16 10
rs549908
IL18
0.752 0.440 11 112150193 synonymous variant T/A;G snv 4.2E-06; 0.29 10
rs10036748
TNIP1
0.752 0.360 5 151078585 intron variant C/A;T snv 11
rs1063320
HLA-G
0.752 0.360 6 29830972 3 prime UTR variant C/G;T snv 12
rs10774625
ATXN2
0.763 0.320 12 111472415 intron variant A/G snv 0.66 13
rs2855812
MICB
0.790 0.360 6 31504943 intron variant G/T snv 0.23 13
rs7044343
LOC107987046 ; IL33
0.752 0.520 9 6254208 intron variant C/T snv 0.51 13
rs7528684
FCRL3
0.752 0.560 1 157701026 upstream gene variant A/G snv 0.57 13
rs12150220
NLRP1
0.724 0.360 17 5582047 missense variant A/T snv 0.37 0.33 14
rs2069718
IFNG ; IFNG-AS1
0.742 0.320 12 68156382 intron variant A/G;T snv 0.50 14
rs2397084
IL17F
0.716 0.480 6 52237046 missense variant T/C snv 6.7E-02 6.1E-02 14
rs396991
FCGR3A
0.742 0.480 1 161544752 missense variant A/C;G;T snv 0.33; 4.1E-06 14
rs721917
SFTPD
0.752 0.360 10 79946568 missense variant A/G snv 0.47 0.42 14
rs1050501
FCGR2B
0.732 0.440 1 161674008 missense variant T/C snv 0.16 0.19 15
rs2670660
NLRP1
0.708 0.400 17 5615686 intron variant A/G snv 0.41 15
rs3819024
IL17A
0.701 0.560 6 52185988 upstream gene variant A/G snv 0.34 17
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs2069705
IFNG-AS1 ; IFNG
0.695 0.440 12 68161231 intron variant G/A;C snv 19