Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs5186
AGTR1
0.630 0.560 3 148742201 3 prime UTR variant A/C snv 0.23 0.21 38
rs696217
GHRL ; GHRLOS
0.662 0.640 3 10289773 missense variant G/T snv 8.8E-02 7.1E-02 32
rs1040288
NR3C2
1.000 0.040 4 148126966 intron variant G/C snv 0.49 3
rs10938397 0.851 0.200 4 45180510 intergenic variant A/G snv 0.37 19
rs11099680
NR3C2
1.000 0.040 4 148182095 intron variant G/A snv 0.78 2
rs1554483
CLOCK
0.882 0.160 4 55455650 intron variant C/G snv 0.33 5
rs1799883
FABP2
0.658 0.440 4 119320747 missense variant T/A;C;G snv 0.73 36
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs4580704
CLOCK
0.790 0.200 4 55460540 intron variant G/C snv 0.69 13
rs4588
GC
0.597 0.720 4 71752606 missense variant G/A;T snv 1.6E-05; 0.25 53
rs4864548
CLOCK
0.827 0.160 4 55547636 non coding transcript exon variant G/A snv 0.33 8
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 64
rs8192678
PPARGC1A
0.667 0.440 4 23814039 missense variant C/T snv 0.31 0.26 28
rs1042713
ADRB2
0.576 0.800 5 148826877 missense variant G/A snv 0.42 0.43 63
rs1042714
ADRB2
0.597 0.640 5 148826910 stop gained G/C;T snv 0.68 54
rs1801394
FASTKD3 ; MTRR
0.531 0.840 5 7870860 missense variant A/G snv 0.47 0.45 101
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs56149945
NR3C1
0.595 0.680 5 143399752 missense variant T/A;C snv 2.0E-02 49
rs146052672
HMGA1
0.851 0.160 6 34242693 intron variant -/C delins 5
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs5370
EDN1
0.630 0.520 6 12296022 missense variant G/T snv 0.23 0.21 37
rs6929846
BTN2A1
0.827 0.160 6 26458037 5 prime UTR variant T/C snv 0.70 10
rs76863441
PLA2G7
0.672 0.440 6 46709361 missense variant C/A snv 4.5E-03 1.3E-03 25
rs16139
NPY ; LOC107986777
0.658 0.560 7 24285260 missense variant T/A;C snv 4.0E-06; 3.0E-02 36