DisGeNET - a database of gene-disease associations

List of shared variants

Hypertensive disease, C0020538

Disease: Metabolic Syndrome X

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs6929846	BTN2A1	0.827	0.160	6	26458037	5 prime UTR variant	T/C	snv		0.70	10
rs846910	HSD11B1 ; HSD11B1-AS1	0.882	0.160	1	209701909	intron variant	A/G	snv		0.95	6
rs9925481	CLEC16A	0.882	0.160	16	11003622	intron variant	C/G;T	snv			5
rs10938397		0.851	0.200	4	45180510	intergenic variant	A/G	snv		0.37	19
rs174546	FADS1 ; FADS2	0.807	0.200	11	61802358	3 prime UTR variant	C/T	snv		0.28	17
rs34911341	GHRL ; GHRLOS	0.882	0.200	3	10289835	missense variant	C/T	snv	7.0E-03	7.3E-03	5
rs4580704	CLOCK	0.790	0.200	4	55460540	intron variant	G/C	snv		0.69	13
rs55951658	CYP3A4	0.827	0.200	7	99770202	missense variant	T/A;C	snv	4.1E-04	9.8E-05	7
rs1800775	CETP	0.790	0.240	16	56961324	upstream gene variant	C/A;G	snv	0.51; 5.7E-06		18
rs7138803		0.827	0.240	12	49853685	intergenic variant	G/A;T	snv			17
rs750359414	RETN	0.851	0.240	19	7669884	missense variant	C/G;T	snv	4.0E-06; 4.0E-06		5
rs11066280	HECTD4	0.742	0.280	12	112379979	intron variant	T/A	snv		7.0E-03	27
rs2108622	CYP4F2	0.742	0.280	19	15879621	missense variant	C/T	snv	0.27	0.22	20
rs2383207	CDKN2B-AS1	0.695	0.280	9	22115960	intron variant	A/G	snv		0.64	22
rs3764261		0.732	0.280	16	56959412	upstream gene variant	C/A	snv		0.31	26
rs11646213		0.827	0.320	16	82609046	intergenic variant	A/T	snv		0.47	6
rs1761667	CD36	0.752	0.320	7	80615623	intron variant	G/A	snv		0.49	12
rs700518	CYP19A1 ; MIR4713HG	0.732	0.320	15	51236915	synonymous variant	T/C	snv	0.43	0.40	13
rs2241883	FABP1	0.763	0.360	2	88124547	missense variant	T/C	snv	0.30	0.29	14
rs5219	KCNJ11	0.701	0.360	11	17388025	stop gained	T/A;C	snv	0.64		25
rs651821	APOA5	0.851	0.360	11	116791863	5 prime UTR variant	C/T	snv	0.88	0.89	17
rs225014	DIO2	0.695	0.400	14	80203237	missense variant	T/C	snv	0.41	0.39	22
rs3135506	APOA5	0.708	0.400	11	116791691	missense variant	G/A;C	snv	3.0E-05; 6.8E-02		26
rs4402960	IGF2BP2	0.724	0.400	3	185793899	intron variant	G/T	snv		0.38	21
rs5882	CETP	0.649	0.400	16	56982180	missense variant	G/A;C	snv	0.62		35