Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2383207
CDKN2B-AS1
0.695 0.280 9 22115960 intron variant A/G snv 0.64 22
rs266729
ADIPOQ
0.637 0.560 3 186841685 upstream gene variant C/A;G;T snv 37
rs2943641 0.763 0.160 2 226229029 intergenic variant T/C snv 0.67 18
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs3782889
MYL2
0.851 0.160 12 110912851 intron variant A/G snv 7.1E-02 5
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4402960
IGF2BP2
0.724 0.400 3 185793899 intron variant G/T snv 0.38 21
rs4580704
CLOCK
0.790 0.200 4 55460540 intron variant G/C snv 0.69 13
rs4864548
CLOCK
0.827 0.160 4 55547636 non coding transcript exon variant G/A snv 0.33 8
rs5068
NPPA ; NPPA-AS1 ; CLCN6
0.776 0.160 1 11845917 3 prime UTR variant A/G;T snv 13
rs662799
APOA5
0.689 0.480 11 116792991 upstream gene variant G/A snv 0.90 33
rs6929846
BTN2A1
0.827 0.160 6 26458037 5 prime UTR variant T/C snv 0.70 10
rs6993
GOT2
0.925 0.080 16 58707463 3 prime UTR variant A/G snv 0.59 3
rs711752
CETP
1.000 0.040 16 56962299 splice region variant G/A;C snv 10
rs7138803 0.827 0.240 12 49853685 intergenic variant G/A;T snv 17
rs7799039
LOC105375494
0.649 0.560 7 128238730 upstream gene variant G/A;C snv 33
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs8057044
FTO
0.882 0.080 16 53778702 intron variant G/A snv 0.54 5
rs846910
HSD11B1 ; HSD11B1-AS1
0.882 0.160 1 209701909 intron variant A/G snv 0.95 6
rs9925481
CLEC16A
0.882 0.160 16 11003622 intron variant C/G;T snv 5
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1337503417
KRT16
0.790 0.160 17 41612325 missense variant G/T snv 4.0E-06 12
rs1267969615
ACE
0.532 0.760 17 63490960 missense variant T/C snv 4.0E-06 100
rs1232898090
PPARA
0.637 0.600 22 46198429 missense variant G/C;T snv 4.0E-06; 4.0E-06 40