Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs711752
CETP
1.000 0.040 16 56962299 splice region variant G/A;C snv 10
rs7138803 0.827 0.240 12 49853685 intergenic variant G/A;T snv 17
rs750359414
RETN
0.851 0.240 19 7669884 missense variant C/G;T snv 4.0E-06; 4.0E-06 5
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237
rs763351020
SERPINE1
0.633 0.560 7 101132046 missense variant C/T snv 4.0E-06 35
rs768925824
LDLR
0.925 0.040 19 11110693 missense variant G/A snv 4.0E-06 4
rs7799039
LOC105375494
0.649 0.560 7 128238730 upstream gene variant G/A;C snv 33
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs9925481
CLEC16A
0.882 0.160 16 11003622 intron variant C/G;T snv 5
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs568401628
ACE
0.882 0.120 17 63497280 missense variant C/T snv 4.5E-05 7.0E-06 4
rs137853240
HNF1A
0.807 0.080 12 120994405 missense variant G/A snv 1.4E-05 8
rs185847354
ADIPOQ ; ADIPOQ-AS1
0.763 0.160 3 186854460 missense variant T/C snv 3.1E-04 7.0E-05 11
rs55951658
CYP3A4
0.827 0.200 7 99770202 missense variant T/A;C snv 4.1E-04 9.8E-05 7
rs76863441
PLA2G7
0.672 0.440 6 46709361 missense variant C/A snv 4.5E-03 1.3E-03 25
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs3782886
BRAP
0.724 0.480 12 111672685 synonymous variant T/C snv 1.9E-02 5.9E-03 22
rs11066280
HECTD4
0.742 0.280 12 112379979 intron variant T/A snv 7.0E-03 27
rs34911341
GHRL ; GHRLOS
0.882 0.200 3 10289835 missense variant C/T snv 7.0E-03 7.3E-03 5
rs268
LPL
0.637 0.480 8 19956018 missense variant A/G snv 1.3E-02 1.3E-02 41
rs696217
GHRL ; GHRLOS
0.662 0.640 3 10289773 missense variant G/T snv 8.8E-02 7.1E-02 32
rs3782889
MYL2
0.851 0.160 12 110912851 intron variant A/G snv 7.1E-02 5
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs4994
ADRB3
0.578 0.640 8 37966280 missense variant A/G snv 0.11 9.2E-02 65
rs1800796
IL6-AS1 ; STEAP1B ; IL6
0.555 0.760 7 22726627 non coding transcript exon variant G/C snv 9.9E-02 74