Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs2187668
LOC107986589 ; HLA-DQA2 ; HLA-DQA1
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 20
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs5029941
TNFAIP3
1.000 0.080 6 137874923 missense variant C/T snv 1.2E-03 5.6E-03 2
rs6920220 0.742 0.440 6 137685367 intron variant G/A snv 0.16 14
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs878859113
CD24
0.763 0.360 6 106971734 missense variant G/A snv 0.35 11
rs9271366 0.807 0.240 6 32619077 intergenic variant G/A snv 0.86 9
rs1045642
ABCB1
0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 214
rs1128503
ABCB1
0.564 0.760 7 87550285 synonymous variant A/G snv 0.54 0.63 64
rs1456896 0.882 0.200 7 50264865 upstream gene variant C/T snv 0.67 5
rs2032582
ABCB1
0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 97
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs7808907
IRF5
1.000 0.080 7 128944030 intron variant T/C snv 0.49 2
rs3810936
TNFSF15
0.742 0.320 9 114790605 synonymous variant T/C snv 0.71 0.75 12
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 16
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73 10
rs6478109
TNFSF15
0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74 12
rs7848647
TNFSF15
0.732 0.320 9 114806766 upstream gene variant T/C snv 0.74 13
rs721917
SFTPD
0.752 0.360 10 79946568 missense variant A/G snv 0.47 0.42 14
rs1188383936
F2
0.524 0.760 11 46725976 missense variant C/T snv 8.0E-06 102
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36 50
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41