Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10036748
TNIP1
0.752 0.360 5 151078585 intron variant C/A;T snv 11
rs10434
VEGFA
0.701 0.480 6 43785475 3 prime UTR variant A/G snv 0.59 17
rs10516487
BANK1
0.752 0.360 4 101829919 missense variant G/A;T snv 0.26; 8.0E-06 11
rs1061622
TNFRSF1B
0.633 0.760 1 12192898 missense variant T/G snv 0.22 0.22 33
rs10822050 0.724 0.240 10 62679011 downstream gene variant T/C snv 0.33 14
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs10988542
FNBP1
0.724 0.240 9 129894985 intron variant G/A;C snv 14
rs11117431 0.807 0.160 16 85981710 intron variant A/G snv 0.18 6
rs11145763
CARD9
0.724 0.240 9 136369144 intron variant A/C;G;T snv 14
rs1137100
LEPR
0.627 0.640 1 65570758 missense variant A/G snv 0.30 0.25 39
rs114846446
LINC01250
0.724 0.240 2 2944140 intron variant G/A snv 9.5E-03 14
rs11580078
C1orf141 ; IL23R
0.724 0.240 1 67203951 intron variant C/A;G snv 14
rs117372389
NKD1
0.724 0.240 16 50634166 3 prime UTR variant G/T snv 1.1E-02 14
rs11741255
IRF1-AS1
0.724 0.240 5 132475490 intron variant G/A snv 0.29 14
rs11839053 0.724 0.240 13 106410694 intergenic variant T/C snv 7.0E-02 14
rs1217414
PTPN22 ; AP4B1-AS1
0.882 0.120 1 113870045 non coding transcript exon variant G/A snv 0.36 3
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs1250563
ZMIZ1
0.724 0.240 10 79287626 intron variant G/C snv 0.24 14
rs12598357 0.724 0.240 16 28329624 intergenic variant A/G snv 0.43 15
rs1267499
LOC101928354
0.807 0.160 6 14715651 intron variant T/A;C snv 6
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06 12
rs12863738 0.724 0.240 X 136949968 intron variant C/T snv 0.16 14
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15