Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2066807
STAT2
0.925 0.080 12 56346898 missense variant C/G snv 4.9E-02 4.6E-02 4
rs8016947 0.925 0.080 14 35363460 intron variant T/G snv 0.60 2
rs1217414
PTPN22 ; AP4B1-AS1
0.882 0.120 1 113870045 non coding transcript exon variant G/A snv 0.36 3
rs4112788 0.851 0.120 1 152578800 downstream gene variant A/G;T snv 4
rs11117431 0.807 0.160 16 85981710 intron variant A/G snv 0.18 6
rs1267499
LOC101928354
0.807 0.160 6 14715651 intron variant T/A;C snv 6
rs35018800
TYK2
0.790 0.160 19 10354167 missense variant G/A snv 4.6E-03 4.9E-03 9
rs4085613 0.827 0.160 1 152577542 downstream gene variant T/G snv 0.59 5
rs4649203 0.851 0.160 1 24193430 intergenic variant G/A snv 0.61 4
rs2243188
LOC105372878 ; IL19
0.851 0.200 1 206841127 intron variant A/C;T snv 0.69 4
rs33980500
TRAF3IP2-AS1 ; TRAF3IP2
0.742 0.200 6 111592059 missense variant C/T snv 8.6E-02 9.7E-02 14
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73 10
rs10822050 0.724 0.240 10 62679011 downstream gene variant T/C snv 0.33 14
rs10988542
FNBP1
0.724 0.240 9 129894985 intron variant G/A;C snv 14
rs11145763
CARD9
0.724 0.240 9 136369144 intron variant A/C;G;T snv 14
rs114846446
LINC01250
0.724 0.240 2 2944140 intron variant G/A snv 9.5E-03 14
rs11580078
C1orf141 ; IL23R
0.724 0.240 1 67203951 intron variant C/A;G snv 14
rs117372389
NKD1
0.724 0.240 16 50634166 3 prime UTR variant G/T snv 1.1E-02 14
rs11741255
IRF1-AS1
0.724 0.240 5 132475490 intron variant G/A snv 0.29 14
rs11839053 0.724 0.240 13 106410694 intergenic variant T/C snv 7.0E-02 14
rs1250563
ZMIZ1
0.724 0.240 10 79287626 intron variant G/C snv 0.24 14
rs12598357 0.724 0.240 16 28329624 intergenic variant A/G snv 0.43 15
rs12863738 0.724 0.240 X 136949968 intron variant C/T snv 0.16 14
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15
rs1332099 0.724 0.240 10 99538694 downstream gene variant T/C;G snv 14