Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 47
rs10503669 0.925 0.080 8 19990179 intergenic variant C/A snv 8.4E-02 8
rs481843
LINC02702
1.000 0.040 11 116655150 non coding transcript exon variant C/T snv 8.8E-02 5
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 19
rs12686004
ABCA1
1.000 0.040 9 104891145 intron variant G/A snv 9.1E-02 6
rs11820589
BUD13
1.000 0.040 11 116763146 missense variant G/A snv 7.8E-02 0.10 5
rs12286037
ZPR1
1.000 0.040 11 116781491 intron variant C/T snv 0.11 6
rs11216126 1.000 0.040 11 116746524 downstream gene variant A/C snv 0.11 4
rs17410962 1.000 0.040 8 19990569 intergenic variant G/A snv 0.15 7
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs780092
GCKR
0.827 0.160 2 27520287 intron variant A/G snv 0.18 10
rs3749147
GPN1 ; CCDC121
0.882 0.120 2 27629051 missense variant G/A snv 0.23 0.20 8
rs10096633 1.000 0.040 8 19973410 regulatory region variant C/T snv 0.22 8
rs1919484 1.000 0.040 8 20012165 intergenic variant G/A snv 0.23 5
rs263
LPL
1.000 0.040 8 19955301 intron variant C/T snv 0.23 4
rs1919128
C2orf16
0.882 0.120 2 27578892 missense variant A/G snv 0.30 0.24 8
rs10468017
ALDH1A2
0.851 0.120 15 58386313 intron variant C/T snv 0.24 12
rs2083637 0.925 0.080 8 20007664 intergenic variant A/G snv 0.25 6
rs17489282 1.000 0.040 8 19995007 regulatory region variant C/T snv 0.25 5
rs301
LPL
0.925 0.160 8 19959423 intron variant T/C snv 0.24 0.26 7
rs1864163
CETP
0.882 0.120 16 56963321 intron variant G/A snv 0.26 10
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 13
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 17
rs174547
FADS2 ; FADS1
0.742 0.240 11 61803311 intron variant T/C snv 0.28 33
rs157582
TOMM40
0.851 0.160 19 44892962 intron variant C/T snv 0.24 0.29 8