DisGeNET - a database of gene-disease associations

List of shared variants

Triglycerides measurement, C0202236

Disease: Metabolic Syndrome X

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs12286037	ZPR1	1.000	0.040	11	116781491	intron variant	C/T	snv		0.11	6
rs157582	TOMM40	0.851	0.160	19	44892962	intron variant	C/T	snv	0.24	0.29	8
rs173539		0.882	0.080	16	56954132	intergenic variant	C/T	snv		0.33	11
rs174546	FADS1 ; FADS2	0.807	0.200	11	61802358	3 prime UTR variant	C/T	snv		0.28	17
rs17489282		1.000	0.040	8	19995007	regulatory region variant	C/T	snv		0.25	5
rs1883025	ABCA1	0.807	0.120	9	104902020	intron variant	C/T	snv		0.28	13
rs2160669	ZPR1	1.000	0.040	11	116776891	3 prime UTR variant	C/T	snv		0.92	5
rs263	LPL	1.000	0.040	8	19955301	intron variant	C/T	snv		0.23	4
rs481843	LINC02702	1.000	0.040	11	116655150	non coding transcript exon variant	C/T	snv		8.8E-02	5
rs58542926	TM6SF2	0.630	0.440	19	19268740	missense variant	C/T	snv	6.5E-02	5.8E-02	42
rs603446	ZPR1	1.000	0.040	11	116783719	intron variant	C/T	snv		0.33	2
rs651821	APOA5	0.851	0.360	11	116791863	5 prime UTR variant	C/T	snv	0.88	0.89	17
rs7412	APOE	0.641	0.640	19	44908822	missense variant	C/T	snv	6.2E-02	7.9E-02	47
rs116843064	ANGPTL4	0.776	0.160	19	8364439	missense variant	G/A	snv	1.3E-02	1.5E-02	16
rs11820589	BUD13	1.000	0.040	11	116763146	missense variant	G/A	snv	7.8E-02	0.10	5
rs12686004	ABCA1	1.000	0.040	9	104891145	intron variant	G/A	snv		9.1E-02	6
rs17410962		1.000	0.040	8	19990569	intergenic variant	G/A	snv		0.15	7
rs1864163	CETP	0.882	0.120	16	56963321	intron variant	G/A	snv		0.26	10
rs1919484		1.000	0.040	8	20012165	intergenic variant	G/A	snv		0.23	5
rs2197089		0.925	0.080	8	19968862	downstream gene variant	G/A	snv		0.61	5
rs2266788	APOA5 ; ZPR1	0.763	0.440	11	116789970	3 prime UTR variant	G/A	snv		0.93	19
rs3749147	GPN1 ; CCDC121	0.882	0.120	2	27629051	missense variant	G/A	snv	0.23	0.20	8
rs662799	APOA5	0.689	0.480	11	116792991	upstream gene variant	G/A	snv		0.90	33
rs3135506	APOA5	0.708	0.400	11	116791691	missense variant	G/A;C	snv	3.0E-05; 6.8E-02		26
rs5882	CETP	0.649	0.400	16	56982180	missense variant	G/A;C	snv	0.62		35