Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06 18
rs180349 0.925 0.200 11 116741111 intergenic variant A/C;T snv 5
rs1864163
CETP
0.882 0.120 16 56963321 intron variant G/A snv 0.26 10
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 13
rs1919128
C2orf16
0.882 0.120 2 27578892 missense variant A/G snv 0.30 0.24 8
rs1919484 1.000 0.040 8 20012165 intergenic variant G/A snv 0.23 5
rs2043085
ALDH1A2
0.827 0.080 15 58388755 intron variant T/C snv 0.54 9
rs2075290
ZPR1
0.882 0.160 11 116782580 intron variant C/G;T snv 10
rs2075291
APOA5 ; ZPR1
0.752 0.400 11 116790676 missense variant C/A;T snv 6.4E-03; 4.0E-06 15
rs2083637 0.925 0.080 8 20007664 intergenic variant A/G snv 0.25 6
rs2160669
ZPR1
1.000 0.040 11 116776891 3 prime UTR variant C/T snv 0.92 5
rs2197089 0.925 0.080 8 19968862 downstream gene variant G/A snv 0.61 5
rs2266788
APOA5 ; ZPR1
0.763 0.440 11 116789970 3 prime UTR variant G/A snv 0.93 19
rs247617 0.827 0.160 16 56956804 regulatory region variant C/A snv 0.29 20
rs263
LPL
1.000 0.040 8 19955301 intron variant C/T snv 0.23 4
rs268
LPL
0.637 0.480 8 19956018 missense variant A/G snv 1.3E-02 1.3E-02 41
rs271
LPL
1.000 0.040 8 19956191 intron variant G/A;T snv 4
rs2943641 0.763 0.160 2 226229029 intergenic variant T/C snv 0.67 18
rs301
LPL
0.925 0.160 8 19959423 intron variant T/C snv 0.24 0.26 7
rs3135506
APOA5
0.708 0.400 11 116791691 missense variant G/A;C snv 3.0E-05; 6.8E-02 26
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 19
rs3749147
GPN1 ; CCDC121
0.882 0.120 2 27629051 missense variant G/A snv 0.23 0.20 8
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66