Disease: Malignant tumor of colon
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2300206
RALY
0.708 0.280 20 34002002 intron variant G/C;T snv 17
rs2974935
MTX1
0.708 0.280 1 155212052 non coding transcript exon variant G/A;C;T snv 17
rs4808075
BABAM1 ; USHBP1
0.701 0.280 19 17279482 intron variant T/C snv 0.26 18
rs481519
NEK10
0.708 0.280 3 27285723 intron variant C/A;T snv 17
rs56084662
FRY
0.701 0.280 13 32295727 3 prime UTR variant G/A snv 3.5E-03 18
rs56404467
FRY
0.708 0.280 13 32265853 intron variant G/A snv 1.3E-02 17
rs73110464
KRT8
0.708 0.280 12 52918828 intron variant C/T snv 0.12 17
rs75316749
LOC107986051
0.701 0.280 3 169043635 intergenic variant A/G snv 4.2E-02 18
rs7725218
TERT
0.708 0.280 5 1282299 intron variant G/A snv 0.38 17
rs1011970
CDKN2B-AS1
0.677 0.320 9 22062135 intron variant G/T snv 0.23 22
rs115707823 0.701 0.320 6 30374976 intergenic variant G/A snv 19
rs2077647
ESR1
0.732 0.320 6 151807942 synonymous variant T/A;C snv 8.1E-06; 0.46 16
rs1042636
CASR
0.672 0.360 3 122284922 missense variant A/G snv 0.15 9.0E-02 23
rs11571833
BRCA2
0.608 0.360 13 32398489 stop gained A/T snv 6.6E-03 6.0E-03 43
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 18
rs2228480
ESR1
0.724 0.360 6 152098960 synonymous variant G/A snv 0.19 0.18 16
rs7931342 0.689 0.360 11 69227030 intergenic variant T/G snv 0.58 20
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1799977
MLH1
0.662 0.440 3 37012077 missense variant A/C;G;T snv 0.23 28
rs1801155
APC
0.649 0.440 5 112839514 missense variant T/A snv 8.0E-06; 2.0E-03 1.2E-03 42
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs7679673 0.677 0.440 4 105140377 intron variant C/A snv 0.50 28
rs1045485
CASP8
0.637 0.480 2 201284866 missense variant G/A;C;T snv 4.0E-06; 9.0E-02 34
rs12917
MGMT ; LOC105378560
0.605 0.480 10 129708019 missense variant C/T snv 0.14 0.14 45