DisGeNET - a database of gene-disease associations

List of associated variants

Human immunodeficiency virus (HIV) II infection category B1, C3854222

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10892151	DSCAML1 ; LOC105369515	1.000		11	117661016	intron variant	C/T	snv		9.7E-02	3
rs1048412	ZNRD1	1.000		6	30064718	3 prime UTR variant	A/G	snv	0.15	0.17	1
rs1272938495	CXCR4 ; LOC112268426	1.000		2	136115225	missense variant	G/A	snv	4.0E-06	7.0E-06	1
rs1276738522	CD9 ; LOC105369625	1.000		12	6232664	start lost	A/G	snv	4.9E-06		1
rs1292288729	CYP2B6	1.000		19	41009375	missense variant	T/C	snv		7.4E-06	1
rs1433591886	PPIG	1.000		2	169633213	missense variant	G/A	snv	4.0E-06		1
rs3740996	TRIM5	1.000		11	5680051	missense variant	G/A	snv	0.13	0.10	1
rs4657412	LMX1A ; LMX1A-AS2	1.000		1	165207796	intron variant	G/A	snv		0.79	1
rs57302492	CD207	1.000		2	70831099	missense variant	T/A	snv	7.0E-02	8.9E-02	1
rs749569169	CHN2 ; LOC107986700	1.000		7	29512676	missense variant	A/G	snv	4.0E-06		1
rs756151230	ERVW-1 ; GATAD1	1.000		7	92470377	missense variant	G/C	snv			1
rs774027752	CYP2A6	1.000		19	40845472	missense variant	T/C	snv	8.0E-06	1.4E-05	1
rs1188975135	APOBEC3C ; APOBEC3F	0.882	0.040	22	39017772	missense variant	T/C	snv	4.0E-06		4
rs1194919682	CXCR4 ; LOC112268426	0.925	0.040	2	136115158	missense variant	A/G	snv			2
rs1799972	OPRM1	0.827	0.080	6	154039561	missense variant	C/A;G;T	snv	4.1E-06; 1.7E-02		6
rs11881222	IFNL3	0.925	0.080	19	39244283	intron variant	A/G	snv		0.30	3
rs7248668		0.925	0.080	19	39253181	upstream gene variant	G/A	snv		0.16	3
rs11045819	SLCO1B1	0.851	0.120	12	21176879	missense variant	C/A;T	snv	0.11; 4.0E-06		4
rs4619915	CXCL11 ; ART3	0.882	0.120	4	76034048	3 prime UTR variant	A/G	snv		0.61	3
rs10833	IL15	0.776	0.160	4	141733394	3 prime UTR variant	T/A;C	snv			10
rs14158	LDLR	0.851	0.160	19	11131368	synonymous variant	G/A	snv	0.24	0.22	5
rs1126477	LTF	0.807	0.200	3	46459778	missense variant	C/T	snv	0.34	0.53	7
rs12252	IFITM3	0.695	0.240	11	320772	splice region variant	A/G	snv	0.13	0.13	23
rs1126478	LTF	0.763	0.240	3	46459723	missense variant	T/C	snv	0.41	0.51	11
rs3921	CXCL10 ; ART3	0.807	0.240	4	76021790	3 prime UTR variant	C/G	snv		0.61	8