DisGeNET - a database of gene-disease associations

List of associated variants

Human immunodeficiency virus (HIV) II infection category B1, C3854222

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs8099917		0.581	0.600	19	39252525	upstream gene variant	T/G	snv		0.16	60
rs7248668		0.925	0.080	19	39253181	upstream gene variant	G/A	snv		0.16	3
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs2241766	ADIPOQ ; ADIPOQ-AS1	0.608	0.720	3	186853103	synonymous variant	T/C;G	snv	8.0E-06; 0.13		48
rs1188975135	APOBEC3C ; APOBEC3F	0.882	0.040	22	39017772	missense variant	T/C	snv	4.0E-06		4
rs113488022	BRAF	0.351	0.840	7	140753336	missense variant	A/C;G;T	snv	4.0E-06		490
rs121913377	BRAF	0.354	0.840	7	140753335	missense variant	CA/AT;TT	mnv			480
rs1799864	CCR2	0.572	0.680	3	46357717	missense variant	G/A	snv	0.13	0.12	68
rs57302492	CD207	1.000		2	70831099	missense variant	T/A	snv	7.0E-02	8.9E-02	1
rs1276738522	CD9 ; LOC105369625	1.000		12	6232664	start lost	A/G	snv	4.9E-06		1
rs749569169	CHN2 ; LOC107986700	1.000		7	29512676	missense variant	A/G	snv	4.0E-06		1
rs3921	CXCL10 ; ART3	0.807	0.240	4	76021790	3 prime UTR variant	C/G	snv		0.61	8
rs4619915	CXCL11 ; ART3	0.882	0.120	4	76034048	3 prime UTR variant	A/G	snv		0.61	3
rs763059810	CXCR4	0.623	0.600	2	136115750	missense variant	T/C	snv	4.0E-06		41
rs781172058	CXCR4	0.732	0.320	2	136115340	synonymous variant	C/T	snv	4.0E-06		16
rs1194919682	CXCR4 ; LOC112268426	0.925	0.040	2	136115158	missense variant	A/G	snv			2
rs1272938495	CXCR4 ; LOC112268426	1.000		2	136115225	missense variant	G/A	snv	4.0E-06	7.0E-06	1
rs774027752	CYP2A6	1.000		19	40845472	missense variant	T/C	snv	8.0E-06	1.4E-05	1
rs3745274	CYP2B6	0.672	0.480	19	41006936	missense variant	G/A;T	snv	4.0E-06; 0.27		30
rs28399499	CYP2B6	0.827	0.280	19	41012316	missense variant	T/C	snv	5.1E-03	2.2E-02	6
rs1292288729	CYP2B6	1.000		19	41009375	missense variant	T/C	snv		7.4E-06	1
rs10892151	DSCAML1 ; LOC105369515	1.000		11	117661016	intron variant	C/T	snv		9.7E-02	3
rs756151230	ERVW-1 ; GATAD1	1.000		7	92470377	missense variant	G/C	snv			1
rs762513613	FCGR2C	0.752	0.280	1	161591315	missense variant	A/G	snv	4.2E-06	7.4E-06	11
rs9939609	FTO	0.559	0.720	16	53786615	intron variant	T/A	snv		0.41	98