HOXC6, homeobox C6, 3223

N. diseases: 80; N. variants: 14
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0007131
Disease:
Non-Small Cell Lung Carcinoma
0.070 GeneticVariation BEFREE Therefore, the rs11614913 SNP in hsa-mir-196a2 may be a prognostic biomarker for NSCLC. 18521189 2008
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.100 GeneticVariation BEFREE We evaluated the associations of selected four SNPs (rs2910164, rs2292832, rs11614913, and rs3746444) in pre-miRNAs (hsa-mir-146a, hsa-mir-149, hsa-mir-196a2, and hsa-mir-499) with breast cancer risk in a case-control study of 1,009 breast cancer cases and 1,093 cancer-free controls in a population of Chinese women and we found that hsa-mir-196a2 rs11614913:T>C and hsa-mir-499 rs3746444:A>G variant genotypes were associated with significantly increased risks of breast cancer (odds ratio [OR], 1.23; 95% confidence interval [CI], 1.02-1.48 for rs11614913:T>C; and OR, 1.25; 95% CI, 1.02-1.51 for rs3746444:A>G in a dominant genetic model) in a dose-effect manner (P for trend was 0.010 and 0.037, respectively). 18634034 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE We evaluated the associations of selected four SNPs (rs2910164, rs2292832, rs11614913, and rs3746444) in pre-miRNAs (hsa-mir-146a, hsa-mir-149, hsa-mir-196a2, and hsa-mir-499) with breast cancer risk in a case-control study of 1,009 breast cancer cases and 1,093 cancer-free controls in a population of Chinese women and we found that hsa-mir-196a2 rs11614913:T>C and hsa-mir-499 rs3746444:A>G variant genotypes were associated with significantly increased risks of breast cancer (odds ratio [OR], 1.23; 95% confidence interval [CI], 1.02-1.48 for rs11614913:T>C; and OR, 1.25; 95% CI, 1.02-1.51 for rs3746444:A>G in a dominant genetic model) in a dose-effect manner (P for trend was 0.010 and 0.037, respectively). 18634034 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C1306460
Disease:
Primary malignant neoplasm of lung
0.100 GeneticVariation BEFREE We found that miR-196a2 rs11614913 variant homozygote CC was associated with approximately 25% significantly increased risk of lung cancer compared with their wild-type homozygote TT and heterozygote TC (odds ratio, 1.25; 95% confidence interval, 1.01-1.54). 19293314 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0242379
Disease:
Malignant neoplasm of lung
0.100 GeneticVariation BEFREE We found that miR-196a2 rs11614913 variant homozygote CC was associated with approximately 25% significantly increased risk of lung cancer compared with their wild-type homozygote TT and heterozygote TC (odds ratio, 1.25; 95% confidence interval, 1.01-1.54). 19293314 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0684249
Disease:
Carcinoma of lung
0.100 GeneticVariation BEFREE We found that miR-196a2 rs11614913 variant homozygote CC was associated with approximately 25% significantly increased risk of lung cancer compared with their wild-type homozygote TT and heterozygote TC (odds ratio, 1.25; 95% confidence interval, 1.01-1.54). 19293314 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0010068
Disease:
Coronary heart disease
0.030 GeneticVariation BEFREE This is the first study to indicate that miR-196a2 rs11614913 plays a role in sporadic CHD susceptibility. 19514064 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0152021
Disease:
Congenital heart disease
0.010 GeneticVariation BEFREE Recently, we found that a genetic variant of rs11614913 in the miR-196a2 sequence could alter mature miR-196a expression and target mRNA binding; this observation led us to hypothesize that rs11614913 might influence susceptibility to sporadic congenital heart disease (CHD). 19514064 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.100 GeneticVariation BEFREE We first performed a genetic association analysis by screening genetic variants in 15 miRNA genes and detected that a common sequence variant in hsa-miR-196a-2 (rs11614913, C-->T) was significantly associated with decreased breast cancer risk (for homozygous variant: odds ratio, 0.44; 95% confidence interval, 0.28-0.70). 19567675 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE We first performed a genetic association analysis by screening genetic variants in 15 miRNA genes and detected that a common sequence variant in hsa-miR-196a-2 (rs11614913, C-->T) was significantly associated with decreased breast cancer risk (for homozygous variant: odds ratio, 0.44; 95% confidence interval, 0.28-0.70). 19567675 2009
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0699791
Disease:
Stomach Carcinoma
0.100 GeneticVariation BEFREE To evaluate the association between genetic polymorphism of miR-196a-2 (rs11614913) and risk of gastric cancer, a hospital-based case-control study was conducted in a Chinese population. 19834808 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0024623
Disease:
Malignant neoplasm of stomach
0.100 GeneticVariation BEFREE To evaluate the association between genetic polymorphism of miR-196a-2 (rs11614913) and risk of gastric cancer, a hospital-based case-control study was conducted in a Chinese population. 19834808 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE We compared the genotype and allele frequencies of rs2910164, rs11614913 and rs3746444 in cases versus controls of the German and Italian series, and of the two series combined; we also investigated the effect of the three SNPs on age at breast cancer diagnosis. 19847796 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.100 GeneticVariation BEFREE In conclusion, our data suggested lack of association between SNPs rs2910164, rs11614913 and rs3746444 and breast cancer risk, or age at breast cancer onset. 19847796 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0003165
Disease:
Anthracosis
0.010 GeneticVariation BEFREE In a case-control study of 496 CWP patients and 513 control subjects frequency matched by exposure years and work types, we genotyped four single-nucleotide polymorphisms (SNPs) (rs2910164, rs2292832, rs11614913 and rs3746444) in pre-miRNAs (miR-146a, miR-149, miR-196a2 and miR-499) and assessed the associations with risk of CWP. 19881472 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C2239176
Disease:
Liver carcinoma
0.100 GeneticVariation BEFREE In our study group, there was no significant association between MIR196A2 polymorphism and the risk of HBV-related HCC in all subjects, however, the risk of HCC was significantly higher with MIR196A2 rs11614913 CC genotype or C allele compared with those with the TT genotype or T allele in male patients. 20188135 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0684249
Disease:
Carcinoma of lung
0.100 GeneticVariation BEFREE Recent studies have implicated that the rs11614913 SNP in MIR196A2 was associated with susceptibility of lung cancer, congenital heart disease, breast cancer and shortened survival time of nonsmall cell lung cancer. 20188135 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0242379
Disease:
Malignant neoplasm of lung
0.100 GeneticVariation BEFREE Recent studies have implicated that the rs11614913 SNP in MIR196A2 was associated with susceptibility of lung cancer, congenital heart disease, breast cancer and shortened survival time of nonsmall cell lung cancer. 20188135 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C1306460
Disease:
Primary malignant neoplasm of lung
0.100 GeneticVariation BEFREE Recent studies have implicated that the rs11614913 SNP in MIR196A2 was associated with susceptibility of lung cancer, congenital heart disease, breast cancer and shortened survival time of nonsmall cell lung cancer. 20188135 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0007131
Disease:
Non-Small Cell Lung Carcinoma
0.070 GeneticVariation BEFREE Recent studies have implicated that the rs11614913 SNP in MIR196A2 was associated with susceptibility of lung cancer, congenital heart disease, breast cancer and shortened survival time of nonsmall cell lung cancer. 20188135 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0242379
Disease:
Malignant neoplasm of lung
0.100 GeneticVariation BEFREE Recently, different genotypes of miR-196a polymorphisms (SNP, rs11614913) were found to be associated with the survival of patients with lung cancer and increased risk of breast cancer. 20229273 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0678222
Disease:
Breast Carcinoma
0.100 GeneticVariation BEFREE Recently, different genotypes of miR-196a polymorphisms (SNP, rs11614913) were found to be associated with the survival of patients with lung cancer and increased risk of breast cancer. 20229273 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0684249
Disease:
Carcinoma of lung
0.100 GeneticVariation BEFREE Recently, different genotypes of miR-196a polymorphisms (SNP, rs11614913) were found to be associated with the survival of patients with lung cancer and increased risk of breast cancer. 20229273 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C1306460
Disease:
Primary malignant neoplasm of lung
0.100 GeneticVariation BEFREE Recently, different genotypes of miR-196a polymorphisms (SNP, rs11614913) were found to be associated with the survival of patients with lung cancer and increased risk of breast cancer. 20229273 2010
dbSNP: rs11614913
rs11614913
Entrez Id: 3223;406973
Gene Symbol: HOXC6;MIR196A2
HOXC6;MIR196A2
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.100 GeneticVariation BEFREE Recently, different genotypes of miR-196a polymorphisms (SNP, rs11614913) were found to be associated with the survival of patients with lung cancer and increased risk of breast cancer. 20229273 2010