Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 641
Gene Symbol: BLM
BLM
0.110 Biomarker group HPO
Entrez Id: 6391
Gene Symbol: SDHC
SDHC
0.100 Biomarker group HPO
Entrez Id: 6392
Gene Symbol: SDHD
SDHD
0.100 Biomarker group HPO
Entrez Id: 6390
Gene Symbol: SDHB
SDHB
0.100 Biomarker group HPO
Entrez Id: 3040
Gene Symbol: HBA2
HBA2
0.010 Biomarker group BEFREE DNA fingerprinting with three different probes (33.15, 33.6, and alpha-globin 3'HVR) was investigated as a method for the determination of clonality in gastrointestinal tumors. 3183051 1988
Entrez Id: 3039
Gene Symbol: HBA1
HBA1
0.010 Biomarker group BEFREE DNA fingerprinting with three different probes (33.15, 33.6, and alpha-globin 3'HVR) was investigated as a method for the determination of clonality in gastrointestinal tumors. 3183051 1988
Entrez Id: 6750
Gene Symbol: SST
SST
0.020 AlteredExpression group BEFREE For comparison, three SS-producing tumors, i.e., two human medullary thyroid carcinomas and one neuroendocrine gut tumor, were shown to have a high level of immunoreactive tissue SS, reaching, respectively, 2807, 401, and 22 pg/mg tissue, as well as moderate to high levels of SS mRNA detected with in situ hybridization. 1980601 1990
Entrez Id: 1630
Gene Symbol: DCC
DCC
0.010 AlteredExpression group BEFREE In all gastrointestinal tumors the expression of DCC gene was absent, while it was present in normal tissue. 8297153 1994
Entrez Id: 960
Gene Symbol: CD44
CD44
0.020 GeneticVariation group BEFREE Abnormal retention of intron 9 in CD44 gene transcripts in human gastrointestinal tumors. 7545538 1995
Entrez Id: 2272
Gene Symbol: FHIT
FHIT
0.030 GeneticVariation group BEFREE Potential gastrointestinal tumor suppressor locus at the 3p14.2 FRA3B site identified by homozygous deletions in tumor cell lines. 8640789 1996
Entrez Id: 2272
Gene Symbol: FHIT
FHIT
0.030 GeneticVariation group BEFREE The FHIT gene, identified recently in chromosome 3p14.2, shows frequent allelic deletion and aberrant transcripts in gastrointestinal tumors. 9108441 1997
Entrez Id: 1874
Gene Symbol: E2F4
E2F4
0.010 GeneticVariation group BEFREE Twenty-two of 59 gastrointestinal tumors (37%) contained E2F-4 mutations; these comprised 5 of 16 gastric tumors (31%), 4 of 12 ulcerative colitis-associated neoplasms (33%, including 1 dysplastic lesion), and 13 of 31 sporadic colorectal cancers (42%). 9192806 1997
Entrez Id: 324
Gene Symbol: APC
APC
0.330 GeneticVariation group BEFREE Established MSH6-null mice present a frequent occurrence of gastrointestinal tumors without microsatellite instability (MI), suggesting the possibility of the APC gene being a mutational target. 9808525 1998
Entrez Id: 641
Gene Symbol: BLM
BLM
0.110 GeneticVariation group BEFREE Mutational studies of 57 sporadic gastrointestinal tumor DNAs revealed the presence of length variations in three of them: (a) BLM; (b) CBL; and (c) HOXA1. 9731483 1998
Entrez Id: 3198
Gene Symbol: HOXA1
HOXA1
0.010 GeneticVariation group BEFREE Mutational studies of 57 sporadic gastrointestinal tumor DNAs revealed the presence of length variations in three of them: (a) BLM; (b) CBL; and (c) HOXA1. 9731483 1998
Entrez Id: 339
Gene Symbol: APOBEC1
APOBEC1
0.010 AlteredExpression group BEFREE Apobec-1 messenger RNA (mRNA) undergoes alternative splicing, generating a catalytically inactive peptide, apobec-T. We have examined apobec-1 gene expression in human gastrointestinal tumors and in colon cancer-derived cell lines. 9797364 1998
Entrez Id: 867
Gene Symbol: CBL
CBL
0.010 GeneticVariation group BEFREE The coding region of the Bloom syndrome BLM gene and of the CBL proto-oncogene is mutated in genetically unstable sporadic gastrointestinal tumors. 9731483 1998
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 Biomarker group BEFREE These results confirm an important role for SMAD4 in the development of gastrointestinal tumors. 9582123 1998
Entrez Id: 2956
Gene Symbol: MSH6
MSH6
0.010 Biomarker group BEFREE Established MSH6-null mice present a frequent occurrence of gastrointestinal tumors without microsatellite instability (MI), suggesting the possibility of the APC gene being a mutational target. 9808525 1998
Entrez Id: 324
Gene Symbol: APC
APC
0.330 GeneticVariation group BEFREE The mutated genes with positive or negative roles in cell growth or survival in aneuploid gastrointestinal cancer (e.g., APC, K-ras, and p53) are less frequently mutated in near-diploid MMP gastrointestinal tumors. 10383166 1999
Entrez Id: 2191
Gene Symbol: FAP
FAP
0.010 Biomarker group BEFREE FAP coli patients treated by prophylactic surgery are now known to be at risk of developing adenomas anywhere in the intestine and many affected patients later die from upper gastrointestinal tumors. 10604226 1999
Entrez Id: 427
Gene Symbol: ASAH1
ASAH1
0.010 AlteredExpression group BEFREE Interestingly, while the AC-mRNA is expressed in all segments of the normal gastrointestinal tract, none of the gastrointestinal tumor tissues had any AC-mRNA expression. 10993717 2000
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.010 GeneticVariation group BEFREE Analysis of the PTEN gene mutation in polyposis syndromes and sporadic gastrointestinal tumors in Japanese patients. 11052475 2000
Entrez Id: 6925
Gene Symbol: TCF4
TCF4
0.010 GeneticVariation group BEFREE We carried out a sequencing analysis of the Tcf-4 gene in 41 Japanese patients with gastrointestinal tumors with MSI as well as in cancer cell lines. 11528255 2001
Entrez Id: 2264
Gene Symbol: FGFR4
FGFR4
0.010 AlteredExpression group BEFREE EphB2, a member of the Eph receptor protein-tyrosine kinase family, is overexpressed in several human gastrointestinal tumors. 11166921 2001