Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3148
Gene Symbol: HMGB2
HMGB2
0.010 AlteredExpression group BEFREE High HMGB1, HMGB2, and HMGB3 expression may predict a poor prognosis among patients with GC (hazard ratios [HR] = 1.90; 95% confidence interval [CI]: [1.30-2.78]) and human digestive system neoplasm (HR = 1.85; 95% CI [1.64-2.10]). 31621076 2020
Entrez Id: 3149
Gene Symbol: HMGB3
HMGB3
0.010 AlteredExpression group BEFREE High HMGB1, HMGB2, and HMGB3 expression may predict a poor prognosis among patients with GC (hazard ratios [HR] = 1.90; 95% confidence interval [CI]: [1.30-2.78]) and human digestive system neoplasm (HR = 1.85; 95% CI [1.64-2.10]). 31621076 2020
Entrez Id: 9201
Gene Symbol: DCLK1
DCLK1
0.010 Biomarker group BEFREE Recent researches have revealed that DCLK1 is closely related to EMT process of tumor cells, meanwhile, it could also be used as a biomarker in gastrointestinal tumors to predict the prognoses of patients. 31837335 2020
Entrez Id: 29072
Gene Symbol: SETD2
SETD2
0.010 Biomarker group BEFREE SETD2, an epigenetic tumor suppressor: a focused review on GI tumor. 31585917 2020
Entrez Id: 50945
Gene Symbol: TBX22
TBX22
0.010 Biomarker group BEFREE Mice (prophylactic: 8-10 weeks; therapeutic: > 36 weeks) received a single injection of cyclophosphamide (CPX, 120 mg/kg bw, i.p.) or gemcitabine (GEM, 100 mg/kg bw, i.p.) prior to vaccination (lysate of a gastrointestinal tumor allograft, 10 mg/kg bw, n = 9 mice/group). 30630527 2019
Entrez Id: 7432
Gene Symbol: VIP
VIP
0.010 Biomarker group BEFREE Although VPAC1 and its ligand vasoactive intestinal peptide (VIP) are important in gastrointestinal physiology, their involvements in progression of gastrointestinal tumor have not been explored. 30692637 2019
Entrez Id: 6790
Gene Symbol: AURKA
AURKA
0.010 Biomarker group BEFREE Agents that inhibit AURKA might slow the growth of gastrointestinal tumors with activation of KRAS. 30342037 2019
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.010 Biomarker group BEFREE Claudin7 (cld7) is a cancer-initiating cell (CIC) marker in gastrointestinal tumors, a cld7-knockdown (kd) being accompanied by loss of tumor progression. 30945750 2019
Entrez Id: 1371
Gene Symbol: CPOX
CPOX
0.010 Biomarker group BEFREE Mice (prophylactic: 8-10 weeks; therapeutic: > 36 weeks) received a single injection of cyclophosphamide (CPX, 120 mg/kg bw, i.p.) or gemcitabine (GEM, 100 mg/kg bw, i.p.) prior to vaccination (lysate of a gastrointestinal tumor allograft, 10 mg/kg bw, n = 9 mice/group). 30630527 2019
Entrez Id: 149233
Gene Symbol: IL23R
IL23R
0.010 GeneticVariation group BEFREE Meta-analysis shown that IL23R rs1884444 increased the risk of overall disease in allele model (OR = 1.16, 95% CI: 1.08-1.25, P <  .001), and also increased the risk of gastrointestinal tumor (OR = 1.18, 95% CI: 1.05-1.31, P = .005). 31197899 2019
Entrez Id: 1116
Gene Symbol: CHI3L1
CHI3L1
0.010 Biomarker group BEFREE We also found that elevated serum/plasma YKL-40 had significant prognostic effects on OS in various cancer subgroups such as gastrointestinal tumors (HR, 1.37; 95% CI 1.18-1.58), ovarian cancer (HR, 2.27; 95% CI 1.69-3.06), melanoma (HR, 1.77; 95% CI 1.18-2.67), lung cancer (HR, 1.73; 95% CI 1.35-2.23), urologic neoplasms (HR, 1.61; 95% CI 1.08-2.40) and glioblastoma (HR, 1.23; 95% CI 1.07-1.42); in contrast, the prognostic effect of serum/plasma YKL-40 was not statistically significant in breast cancer (HR, 1.07; 95% CI 0.98-1.17). 31624472 2019
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.010 GeneticVariation group BEFREE Analysis of 318 STS by CGH array evidenced a frequent deletion affecting the <i>DMD</i> gene (encoding dystrophin isoforms) in 16.5% of STS, including sarcomas with complex genomics, gastrointestinal tumors (GIST), and synovial sarcomas (SS). 31266185 2019
Entrez Id: 961
Gene Symbol: CD47
CD47
0.010 Biomarker group BEFREE It acts as myeloid immune checkpoint and thus has prognostic and therapeutic implications.<b>Areas covered</b>: This review presents and discusses the currently available data on the prognostic role and therapeutic value of CD47 in gastrointestinal tumors.<b>Expert opinion</b>: CD47 is overexpressed on the great majority of gastrointestinal tumors, cancer stem cells and circulating tumor cells. 31686549 2019
Entrez Id: 5792
Gene Symbol: PTPRF
PTPRF
0.010 Biomarker group BEFREE Poly(d,l-lactide-co-glycolide) (PLGA) microspheres have been used as an injectable depot for prolonged release of octreotide (Sandostatin LAR®), a peptide drug for the treatment of acromegaly and gastrointestinal tumors. 31147054 2019
Entrez Id: 10682
Gene Symbol: EBP
EBP
0.010 Biomarker group BEFREE Mice (prophylactic: 8-10 weeks; therapeutic: > 36 weeks) received a single injection of cyclophosphamide (CPX, 120 mg/kg bw, i.p.) or gemcitabine (GEM, 100 mg/kg bw, i.p.) prior to vaccination (lysate of a gastrointestinal tumor allograft, 10 mg/kg bw, n = 9 mice/group). 30630527 2019
Entrez Id: 6472
Gene Symbol: SHMT2
SHMT2
0.010 AlteredExpression group BEFREE The high expression of SHMT2 is correlated with gastrointestinal tumors progression, and poor prognosis, which is a potential new target for the diagnosis and treatment of gastrointestinal tumors. 31773687 2019
Entrez Id: 7433
Gene Symbol: VIPR1
VIPR1
0.010 Biomarker group BEFREE Although VPAC1 and its ligand vasoactive intestinal peptide (VIP) are important in gastrointestinal physiology, their involvements in progression of gastrointestinal tumor have not been explored. 30692637 2019
Entrez Id: 55294
Gene Symbol: FBXW7
FBXW7
0.010 AlteredExpression group BEFREE Therefore, an in-depth study of the regulatory mechanisms involved in disorders of Fbw7 expression and the role of Fbw7 in chemoresistance of gastrointestinal tumors may suggest improvements for early diagnostic screening and targeted therapy. 30881487 2019
Entrez Id: 5726
Gene Symbol: TAS2R38
TAS2R38
0.010 Biomarker group BEFREE In conclusion, the meta-analysis indicates that TAS2R38 diplotype minimally modified the GI neoplasm risk. 30663393 2019
Entrez Id: 1756
Gene Symbol: DMD
DMD
0.010 GeneticVariation group BEFREE Analysis of 318 STS by CGH array evidenced a frequent deletion affecting the <i>DMD</i> gene (encoding dystrophin isoforms) in 16.5% of STS, including sarcomas with complex genomics, gastrointestinal tumors (GIST), and synovial sarcomas (SS). 31266185 2019
Entrez Id: 174
Gene Symbol: AFP
AFP
0.010 Biomarker group BEFREE Reference intervals for gastrointestinal tumor markers (AFP, CEA, CA199 and CA724) in healthy adults of Han nationality in Chongqing by Roche ECLIA system. 31599689 2019
Entrez Id: 5047
Gene Symbol: PAEP
PAEP
0.010 Biomarker group BEFREE This is a single-center, open-label, phase 1 trial of ADI-PEG 20 and modified FOLFOX6 (mFOLFOX6) in treatment-refractory hepatocellular carcinoma (HCC) and other advanced gastrointestinal tumors. 29971467 2018
Entrez Id: 50507
Gene Symbol: NOX4
NOX4
0.010 AlteredExpression group BEFREE The nicotinamide adenine dinucleotide phosphate (NADPH) oxidase subunit 4 (NOX4), a substrate of NADPH that can generate H<sub>2</sub> O<sub>2</sub> reactive oxygen species, has been reported to be highly expressed in gastrointestinal tumors. 30058122 2018
Entrez Id: 6622
Gene Symbol: SNCA
SNCA
0.010 AlteredExpression group BEFREE Overexpression of PD-1 markers in solid gastrointestinal tumors is a consequence of deficiency in DNA mismatch repair mechanism. 30510858 2018
Entrez Id: 9825
Gene Symbol: SPATA2
SPATA2
0.010 AlteredExpression group BEFREE Overexpression of PD-1 markers in solid gastrointestinal tumors is a consequence of deficiency in DNA mismatch repair mechanism. 30510858 2018