Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 472
Gene Symbol: ATM
ATM
0.330 GeneticVariation disease BEFREE In addition, we describe new and recurrent, albeit less frequent, genetic defects including mutations in FYN, ATM, B2M and CD58 implicating SRC signaling, impaired DNA damage response and escape from immune surveillance mechanisms in the pathogenesis of PTCL. 24413734 2014
Entrez Id: 472
Gene Symbol: ATM
ATM
0.330 Biomarker disease BEFREE Our findings contribute insights into the genetics of PTCL and suggest a relationship between γc signaling and ATM in T cell malignancy. 26536348 2015
Entrez Id: 472
Gene Symbol: ATM
ATM
0.330 GeneticVariation disease BEFREE A frame-shift ATM mutation was found in one peripheral T cell lymphoma patient. 12697903 2003
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.310 Biomarker disease BEFREE Herein, to improve the current molecular classification between AITL and PTCL-NOS, we analyzed the transcriptional profiles from 503 PTCLs stratified according to their molecular configuration and integrated them with genomic data of recurrently mutated genes (RHOA <sup>G17V</sup> , TET2, IDH2 <sup>R172</sup> , and DNMT3A) in 53 cases (39 AITLs and 14 PTCL-NOSs) included in the series. 30829413 2019
Entrez Id: 940
Gene Symbol: CD28
CD28
0.310 Biomarker disease CTD_human Genomic landscape of cutaneous T cell lymphoma. 26192916 2015
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.310 Biomarker disease CTD_human Somatic RHOA mutation in angioimmunoblastic T cell lymphoma. 24413737 2014
Entrez Id: 5819
Gene Symbol: NECTIN2
NECTIN2
0.310 GeneticVariation disease LHGDN These results suggest that both BCL3 and PVRL2 may participate in the pathogenesis of these PTCLs, but further studies should be undertaken to investigate the precise role of these genes. 17696193 2007
Entrez Id: 965
Gene Symbol: CD58
CD58
0.310 Biomarker disease CTD_human In addition, we describe new and recurrent, albeit less frequent, genetic defects including mutations in FYN, ATM, B2M and CD58 implicating SRC signaling, impaired DNA damage response and escape from immune surveillance mechanisms in the pathogenesis of PTCL. 24413734 2014
Entrez Id: 2534
Gene Symbol: FYN
FYN
0.310 Biomarker disease CTD_human In addition, we describe new and recurrent, albeit less frequent, genetic defects including mutations in FYN, ATM, B2M and CD58 implicating SRC signaling, impaired DNA damage response and escape from immune surveillance mechanisms in the pathogenesis of PTCL. 24413734 2014
Entrez Id: 965
Gene Symbol: CD58
CD58
0.310 Biomarker disease BEFREE In addition, we describe new and recurrent, albeit less frequent, genetic defects including mutations in FYN, ATM, B2M and CD58 implicating SRC signaling, impaired DNA damage response and escape from immune surveillance mechanisms in the pathogenesis of PTCL. 24413734 2014
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.310 Biomarker disease CTD_human These analyses identified highly recurrent epigenetic factor mutations in TET2, DNMT3A and IDH2 as well as a new highly prevalent RHOA mutation encoding a p.Gly17Val alteration present in 22 of 35 (67%) angioimmunoblastic T cell lymphoma (AITL) samples and in 8 of 44 (18%) PTCL, not otherwise specified (PTCL-NOS) samples. 24413734 2014
Entrez Id: 567
Gene Symbol: B2M
B2M
0.310 AlteredExpression disease BEFREE EZH2 expression was significantly correlated with the presence of B symptoms, elevated LDH and elevated β2 microglobulin (B2M; P<0.05), and HDAC2 expression was significantly correlated with sex, advanced clinical stages, high international prognostic index scores and elevated B2M levels (P<0.05) in all the patients with PTCL. 31423206 2019
Entrez Id: 5819
Gene Symbol: NECTIN2
NECTIN2
0.310 Biomarker disease BEFREE These results suggest that both BCL3 and PVRL2 may participate in the pathogenesis of these PTCLs, but further studies should be undertaken to investigate the precise role of these genes. 17696193 2007
Entrez Id: 940
Gene Symbol: CD28
CD28
0.310 GeneticVariation disease BEFREE We found increased transcription of the CD28-responsive genes CD226 and TNFA in cells expressing the T195P mutant in response to CD3 and CD86 co-stimulation and increased downstream activation of NF-κB by both D124V and T195P mutants, suggesting a potential therapeutic target in CD28-mutated PTCLs. 26719098 2016
Entrez Id: 567
Gene Symbol: B2M
B2M
0.310 Biomarker disease CTD_human Recurrent mutations in epigenetic regulators, RHOA and FYN kinase in peripheral T cell lymphomas. 24413734 2014
Entrez Id: 2534
Gene Symbol: FYN
FYN
0.310 Biomarker disease BEFREE Recurrent mutations in epigenetic regulators, RHOA and FYN kinase in peripheral T cell lymphomas. 24413734 2014
Entrez Id: 5819
Gene Symbol: NECTIN2
NECTIN2
0.310 Biomarker disease CTD_human Peripheral T-cell lymphoma cell line T8ML-1 highlights conspicuous targeting of PVRL2 by t(14;19)(q11.2;q13.3). 28659334 2017
Entrez Id: 149041
Gene Symbol: RC3H1
RC3H1
0.200 Biomarker disease MGD
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 Biomarker disease BEFREE Comparison of survival outcomes revealed that the IRF4/MUM1-positive group exhibited worse survival than the IRF4/MUM1-negative group; moreover, IRF4/MUM1-positive patients with a high level of MYC expression had the worst survival of all patients with nodal PTCL (PTCL-NOS, AITL, and ALCL; n=45) (<i>P < 0.05).</i><b>Conclusions:</b> IRF4/MUM1 expression was associated with poor survival outcomes in PTCL, implying that this gene is a potential therapeutic target. 28529614 2017
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.100 AlteredExpression disease LHGDN The recent finding of SYK/ITK translocations in rare PTCLs led us to examine the expression of Syk PTK in 141 PTCLs. 18401419 2008
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 Biomarker disease BEFREE Angioimmunoblastic T-cell lymphoma (AITL) and peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS) are subtypes of T-cell lymphoma. 25310466 2014
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE The 5-year cumulative incidence of CNS relapse was 1.8% in PTCL-NOS, 0.7% in AITL, 5.4% in ALK+ALCL, 2.1% in ALK-ALCL and 3.7% in ENKL. 29538376 2018
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 Biomarker disease BEFREE The IHC algorithm classification showed high interobserver reproducibility among pathologists and was validated in a second PTCL-NOS cohort (n = 124), where a significant difference in OS between the PTCL-GATA3 and PTCL-TBX21 subtypes was confirmed (P = .003). 31562134 2019
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE Recently, a novel recurring somatic mutation in RHOA, encoding p.Gly17Val, was discovered in nearly 70% of AITLs and in a smaller proportion of peripheral T-cell lymphomas, not otherwise specified (PTCL-NOS). 26574844 2016
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 AlteredExpression disease BEFREE Platelet derived growth factor-α (PDGFR-α) is expressed in peripheral T cell lymphoma, not otherwise specified (PTCL, NOS). 25012943 2015