Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE These analyses identified highly recurrent epigenetic factor mutations in TET2, DNMT3A and IDH2 as well as a new highly prevalent RHOA mutation encoding a p.Gly17Val alteration present in 22 of 35 (67%) angioimmunoblastic T cell lymphoma (AITL) samples and in 8 of 44 (18%) PTCL, not otherwise specified (PTCL-NOS) samples. 24413734 2014
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE The differential diagnosis among the commonest peripheral T-cell lymphomas (PTCLs; ie, PTCL not otherwise specified [NOS], angioimmunoblastic T-cell lymphoma [AITL], and anaplastic large-cell lymphoma [ALCL]) is difficult, with the morphologic and phenotypic features largely overlapping. 23857971 2013
Entrez Id: 3702
Gene Symbol: ITK
ITK
0.100 GeneticVariation disease BEFREE We also identified novel kinase gene fusions, ITK-FER and IKZF2-ERBB4, as candidate therapeutic targets that show similarities to known recurrent oncogenic ITK-SYK fusions and ERBB4 transcript variants in PTCLs, respectively. 27297792 2016
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.100 GeneticVariation disease BEFREE Around one fifth of PTCL-F exhibits t(5;9)(q33;q22)/ITK-SYK chromosomal translocation, which is essentially absent in AITL. 25337257 2014
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 GeneticVariation disease BEFREE Except in ALK-positive anaplastic large cell lymphoma, defined by ALK gene fusions, chromosomal translocations are otherwise rare in PTCLs, but some recurrent rearrangements might be associated with distinct lymphoma subtypes. 19233683 2009
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.100 GeneticVariation disease BEFREE Recently, the t(5, 9)(q33;q22) translocation was found in a subset of peripheral T cell lymphomas and was shown to result in an IL-2-inducible kinase-spleen tyrosine kinase (ITK-Syk) fusion transcript. 24376268 2014
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE The differential diagnosis among the commonest peripheral T-cell lymphomas (PTCLs; ie, PTCL not otherwise specified [NOS], angioimmunoblastic T-cell lymphoma [AITL], and anaplastic large-cell lymphoma [ALCL]) is difficult, with the morphologic and phenotypic features largely overlapping. 23857971 2013
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE In particular, one peripheral T-cell lymphoma (not otherwise specified, NOS) with the morphological variant of Lennert lymphoma displayed a chromosomal translocation t(14;19) involving the TCRalpha/delta and the BCL3 loci. 17582237 2007
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE In the AITL and PTCL-NOS subgroups, TET2 mutations were associated with advanced-stage disease, thrombocytopenia, high International Prognostic Index scores, and a shorter progression-free survival. 22760778 2012
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 GeneticVariation disease BEFREE Others suggested that the histologic features of ALK-ALCL are distinctive nevertheless and that this diagnosis has meaning that is lost by designating these neoplasms as PTCL, unspecified. 17511113 2007
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE PTPN6, a tyrosine phosphatase and potential negative regulator of STAT3 activity, was suppressed in 62% of PTCL-NOS, 42% of AITL, 60% ALK-neg ALCL, and 86% of ALK-pos ALCL. 30420593 2018
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE First-line CHOP and CHOP-like regimens were used in 74% of patients, providing 4-year overall survival (OS) outcomes of 34% (95% confidence interval [CI], 14%-83%) in patients without transplant consolidation (82% in ALCL, 37% in PTCL-NOS, and 0% in AITL). 28622960 2017
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE Only 17% of PTCL-NOS cases were assessed for PD1. 28209473 2017
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE The median patient age was 47 years, 57.1% were male, 34.9% were diagnosed with PTCL-NOS, 28.6% with ALK-/ALCL, 22.2% with ALK+/ALCL, and 14.3% with AITL. 31497245 2019
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE Only 17% of PTCL-NOS cases were assessed for PD1. 28209473 2017
Entrez Id: 3702
Gene Symbol: ITK
ITK
0.100 GeneticVariation disease BEFREE ITK-SYK transcripts were detected in five of 30 (17%) unspecified PTCL, but not in cases of angioimmunoblastic T-cell lymphoma (n=9) and anaplastic lymphoma kinase-negative anaplastic large-cell lymphoma (n=7). 16341044 2006
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 GeneticVariation disease BEFREE Our results suggest that certain cases of peripheral T-cell lymphoma may lack rearrangements of TCR genes--particularly those cases expressing restricted numbers of T-lineage antigens. 3258126 1988
Entrez Id: 238
Gene Symbol: ALK
ALK
0.100 GeneticVariation disease BEFREE We analyzed phospho-STAT3 (pSTAT3) expression in a cohort of 169 PTCL tumors and show overall 38% positivity with varied distribution among PTCL subtypes with 27% (16/59) in PTCL-NOS; 29% (11/38) in AITL, 57% (13/28) in ALK-negative ALCL, and 93% in ALK-pos ALCL (14/15), respectively. 30420593 2018
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE In the AITL and PTCL-NOS subgroups, TET2 mutations were associated with advanced-stage disease, thrombocytopenia, high International Prognostic Index scores, and a shorter progression-free survival. 22760778 2012
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE PTCL, not otherwise specified (PTCL, NOS), the largest PTCL category, which is derived from activated CD4+ (or CD8+) T cells, is markedly heterogeneous, including at the molecular level. 19074096 2008
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE These analyses identified highly recurrent epigenetic factor mutations in TET2, DNMT3A and IDH2 as well as a new highly prevalent RHOA mutation encoding a p.Gly17Val alteration present in 22 of 35 (67%) angioimmunoblastic T cell lymphoma (AITL) samples and in 8 of 44 (18%) PTCL, not otherwise specified (PTCL-NOS) samples. 24413734 2014
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.100 GeneticVariation disease BEFREE ITK-SYK transcripts were detected in five of 30 (17%) unspecified PTCL, but not in cases of angioimmunoblastic T-cell lymphoma (n=9) and anaplastic lymphoma kinase-negative anaplastic large-cell lymphoma (n=7). 16341044 2006
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 GeneticVariation disease BEFREE Further study of PTCL and related entities are needed to establish whether expanded TcR families are common in those cases that fail to exhibit clonal TcR gene rearrangement. 1560311 1992
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.100 GeneticVariation disease BEFREE Rare cases of peripheral T-cell lymphomas with follicular growth pattern (PTCL-F) have been recently reported, and their association with t(5;9)(q33;q22) involving ITK and SYK has been suggested. 19295409 2009
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE First-line CHOP and CHOP-like regimens were used in 74% of patients, providing 4-year overall survival (OS) outcomes of 34% (95% confidence interval [CI], 14%-83%) in patients without transplant consolidation (82% in ALCL, 37% in PTCL-NOS, and 0% in AITL). 28622960 2017