Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 406963
Gene Symbol: MIR187
MIR187
0.010 AlteredExpression disease BEFREE MiR187 was overexpressed in peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS) and associated with high Ki67 expression, elevated lactate dehydrogenase, advanced International Prognostic Index and poor prognosis of patients. 24104394 2014
Entrez Id: 387
Gene Symbol: RHOA
RHOA
0.380 GeneticVariation disease BEFREE RHOA mutations in peripheral T cell lymphoma. 24675518 2014
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.340 GeneticVariation disease BEFREE TET2 loss-of-function mutations are highly frequent in subtypes of T-cell lymphoma that harbor follicular helper T (Tfh)-cell-like features, such as angioimmunoblastic T-cell lymphoma (30-83%) or peripheral T-cell lymphoma, not otherwise specified (10-49%), as well as myeloid malignancies. 25501021 2014
Entrez Id: 9476
Gene Symbol: NAPSA
NAPSA
0.010 AlteredExpression disease BEFREE Napsin A expression was also observed in 13.4% (20/149) of diffuse large B-cell lymphomas (DLBCL), 11.1% (15/134) of Hodgkin lymphomas, 4.9% (2/41) of follicular lymphomas, 6% (4/67) of peripheral T-cell lymphomas, and 3.8% (1/26) of plasma cell neoplasms. 26400099 2016
Entrez Id: 857
Gene Symbol: CAV1
CAV1
0.010 AlteredExpression disease BEFREE Caveolin-1 was upregulated, albeit with a heterogeneous nature, across all mature T-cell lymphoma subtypes, a finding confirmed using immunohistochemical staining on an independent sampling of mature T-cell lymphoma biopsies (n = 65 cases). 26566034 2015
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.010 AlteredExpression disease BEFREE CXCL13 was a relatively sensitive marker in AITL, expressed in 84% of tested cases; however, only 3% of PTCL-NOS cases were tested. 28209473 2017
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.070 AlteredExpression disease BEFREE PD-L1 expression was present in more than 5% of tumour or non-malignant HRS-like cells in 100% of EBV<sup>+</sup> classical (C) Hodgkin lymphoma (HL) (n = 10) and EBV-negative nodular sclerosis CHL (n = 8); 40% of EBV<sup>+</sup> diffuse large B cell lymphoma, not otherwise specified (DLBCL-NOS) (n = 20); and 4% of nodal peripheral T cell lymphoma of follicular helper T cell type (PTCL-TFH) (n = 22). 29380399 2018
Entrez Id: 25859
Gene Symbol: PART1
PART1
0.010 Biomarker disease BEFREE Part 1 will cover PTCL not otherwise specified, follicular T-cell lymphoma, angioimmunoblastic T-cell lymphoma, anaplastic large-cell lymphoma (ALCL), and breast implant-associated ALCL. 30080923 2018
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.070 AlteredExpression disease BEFREE PD-L1 expression in tissues matched very well with the sPD-L1 level in PTCL patients. 31074879 2019
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.010 AlteredExpression disease BEFREE EZH2 expression was significantly correlated with the presence of B symptoms, elevated LDH and elevated β2 microglobulin (B2M; P<0.05), and HDAC2 expression was significantly correlated with sex, advanced clinical stages, high international prognostic index scores and elevated B2M levels (P<0.05) in all the patients with PTCL. 31423206 2019
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.040 Biomarker disease BEFREE LMP-1 was detected in 19/23 EBER positive peripheral T-cell lymphomas (83%). 8181803 1994
Entrez Id: 387
Gene Symbol: RHOA
RHOA
0.380 GeneticVariation disease BEFREE G17V RHOA mutations were identified in 27 of 67 (40.3%) PTCL samples using NGS. ddPCR and PNA-LNA clamp method both detected G17V mutations in 4 samples in addition to those detected with NGS (31 of 67, 46.3%). 29493850 2018
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.080 AlteredExpression disease BEFREE A case of peripheral T-cell lymphoma with aberrant expression of B-cell-associated antigens L-26 (CD20) and mb-1 (CD 79a) is described. 11235901 2001
Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
0.080 AlteredExpression disease BEFREE A case of peripheral T-cell lymphoma with aberrant expression of B-cell-associated antigens L-26 (CD20) and mb-1 (CD 79a) is described. 11235901 2001
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE A distinct subset of patients with peripheral T-cell lymphoma (PTCL) is described which reacts with Leu-19 (CD56), an antibody that has been shown to identify the neural cell adhesion molecule (NCAM). 1373974 1992
Entrez Id: 472
Gene Symbol: ATM
ATM
0.330 GeneticVariation disease BEFREE A frame-shift ATM mutation was found in one peripheral T cell lymphoma patient. 12697903 2003
Entrez Id: 213
Gene Symbol: ALB
ALB
0.010 Biomarker disease BEFREE A new prognostic score comprising lactate dehydrogenase, albumin and neutrophil to lymphocyte ratio to predict sensitivity to first-line chemotherapy in patients with peripheral T-cell lymphomas. 29103138 2018
Entrez Id: 3702
Gene Symbol: ITK
ITK
0.100 Biomarker disease BEFREE A newly developed model of peripheral T cell lymphoma (PTCL) using the ITK-SYK fusion gene should serve as a powerful tool to dissect the signaling cascades important for SYK-associated malignancy in the context of t(5;9) PTCL. 20439538 2010
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.100 Biomarker disease BEFREE A newly developed model of peripheral T cell lymphoma (PTCL) using the ITK-SYK fusion gene should serve as a powerful tool to dissect the signaling cascades important for SYK-associated malignancy in the context of t(5;9) PTCL. 20439538 2010
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.030 GeneticVariation disease BEFREE Accordingly, the combination of THZ1 and the BH3 mimetic obatoclax improves lymphoma growth control in a primary PTCL ex vivo culture and in two STAT3-mutant PTCL xenografts, delineating a potential targeted agent-based therapeutic option for these patients. 28134252 2017
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 Biomarker disease BEFREE Accurate detection of the tumor clone in peripheral T-cell lymphoma biopsies by flow cytometric analysis of TCR-Vβ repertoire. 22627740 2012
Entrez Id: 30009
Gene Symbol: TBX21
TBX21
0.030 GeneticVariation disease BEFREE Additionally, the 2 IHC-defined subtypes were significantly associated with distinct morphological features (P < .001), and there was a significant enrichment of an activated CD8+ cytotoxic phenotype in the PTCL-TBX21 subtype (P = .03). 31562134 2019
Entrez Id: 5914
Gene Symbol: RARA
RARA
0.010 GeneticVariation disease BEFREE After identifying a PTCL with a RARAR394Q mutation, we sought to characterize the role of RARA in T-cell lymphoma cells. 28412739 2017
Entrez Id: 6891
Gene Symbol: TAP2
TAP2
0.010 Biomarker disease BEFREE AL was consistently associated with the highest frequency of EBER among the extranodal PTL: nose (19/20), GI tracts (3/3), skin (14/15), and Waldeyer's ring (11/14). 10072112 1999
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 GeneticVariation disease BEFREE All three lymphoblastic lymphomas and only 4/11 peripheral T-cell lymphomas (PTCL) cases revealed T-cell receptor (TcR) gene rearrangements. 1766259 1991