Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.010 Biomarker disease BEFREE Results suggest that TNF-beta produced by neoplastic T-cells influences clinical features and is involved in histopathogenesis of PTCL. 7696918 1994
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 Biomarker disease BEFREE Our case showed TCR beta rearrangement indicating that the above phenotype can be associated with a peripheral T-cell lymphoma. 7485082 1995
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.100 AlteredExpression disease BEFREE The lack of CD3 and TCRAB membrane expression on otherwise phenotypically normal mature T lymphocytes together with the absence of detectable TCRBV mRNA and clonal rearrangement of TCRB gene suggested that the abnormal lymphocyte population was the expression of a peripheral T-cell lymphoma with an indolent clinical course. 8608231 1996
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE Altogether these findings show that CD5-CD56+ so-called "TCR silent PTCL" bear the immunophenotype and immunogenotype of normal NK cells and display peculiar clinical features distinct from true PTCL. 8608237 1996
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.040 Biomarker disease BEFREE Recently, focused deletions near the 3' end of the LMP-1 gene (del-LMP-1, amino acids 346-355), in a region functionally related to the half-life to the LMP-1 protein, have been reported frequently in human immunodeficiency virus (HIV)-associated HD (100%) and EBV+ Malaysian and Danish peripheral T-cell lymphomas (100%, 61% respectively), but less frequently in cases of HD not associated with HIV (28%, 33%) and infectious mononucleosis (33%). 8704180 1996
Entrez Id: 28639
Gene Symbol: TRBC1
TRBC1
0.010 AlteredExpression disease BEFREE The lack of CD3 and TCRAB membrane expression on otherwise phenotypically normal mature T lymphocytes together with the absence of detectable TCRBV mRNA and clonal rearrangement of TCRB gene suggested that the abnormal lymphocyte population was the expression of a peripheral T-cell lymphoma with an indolent clinical course. 8608231 1996
Entrez Id: 28589
Gene Symbol: TRBV7-9
TRBV7-9
0.010 AlteredExpression disease BEFREE The lack of CD3 and TCRAB membrane expression on otherwise phenotypically normal mature T lymphocytes together with the absence of detectable TCRBV mRNA and clonal rearrangement of TCRB gene suggested that the abnormal lymphocyte population was the expression of a peripheral T-cell lymphoma with an indolent clinical course. 8608231 1996
Entrez Id: 28571
Gene Symbol: TRBV16
TRBV16
0.010 AlteredExpression disease BEFREE The lack of CD3 and TCRAB membrane expression on otherwise phenotypically normal mature T lymphocytes together with the absence of detectable TCRBV mRNA and clonal rearrangement of TCRB gene suggested that the abnormal lymphocyte population was the expression of a peripheral T-cell lymphoma with an indolent clinical course. 8608231 1996
Entrez Id: 6957
Gene Symbol: TRB
TRB
0.010 AlteredExpression disease BEFREE The lack of CD3 and TCRAB membrane expression on otherwise phenotypically normal mature T lymphocytes together with the absence of detectable TCRBV mRNA and clonal rearrangement of TCRB gene suggested that the abnormal lymphocyte population was the expression of a peripheral T-cell lymphoma with an indolent clinical course. 8608231 1996
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE We also studied the expression of these molecules in 92 other cases of T-cell and natural killer (NK) cell neoplasms; 18 anaplastic large cell lymphomas (ALCLs); 63 CD4+ PTCLs; 10 CD56+ nasal lymphomas; and 1 NK-cell leukemia. 9578080 1998
Entrez Id: 9623
Gene Symbol: TCL1B
TCL1B
0.020 Biomarker disease BEFREE These findings suggest that an oncogene other than TCL1 may be located in 14q32.1, and its amplification may be involved in the neoplastic process of PTL. 9639427 1998
Entrez Id: 8115
Gene Symbol: TCL1A
TCL1A
0.020 Biomarker disease BEFREE These findings suggest that an oncogene other than TCL1 may be located in 14q32.1, and its amplification may be involved in the neoplastic process of PTL. 9639427 1998
Entrez Id: 3002
Gene Symbol: GZMB
GZMB
0.010 Biomarker disease BEFREE Most of the CD4+ PTCLs (62 of 63) were negative for GrB, but all of the nasal lymphomas and the NK cell leukemia were positive for both Pf and GrB. 9578080 1998
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE Three cases were "peripheral T-cell lymphomas (PTCL), unspecified" with positivity for CD3, CD8, and betaF1 and negativity for CD56. 10571346 1999
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.040 AlteredExpression disease BEFREE The expression of LMP1 appears to be crucial for the immunophenotype and probably for the morphology of the RS and RS-like cells appearing in diverse lymphoid malignancies, including HD, chronic lymphocytic leukemia, and PTCL. 10524524 1999
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.040 AlteredExpression disease BEFREE Expression of p53 and retinoblastoma gene in high-grade nodal peripheral T-cell lymphomas: immunohistochemical and molecular findings suggesting different pathogenetic pathways and possible clinical implications. 10440751 1999
Entrez Id: 6891
Gene Symbol: TAP2
TAP2
0.010 Biomarker disease BEFREE AL was consistently associated with the highest frequency of EBER among the extranodal PTL: nose (19/20), GI tracts (3/3), skin (14/15), and Waldeyer's ring (11/14). 10072112 1999
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE Thus, there seems to be a useful distinction between the classical NK/T type of nasal lymphoma (CD56+/n-cdk6+/CD44-/TcR-GR-) and PTL (CD56-/n-cdk6-/CD44+/TcR-GR+) involving the nasal region. 10879740 2000
Entrez Id: 4684
Gene Symbol: NCAM1
NCAM1
0.100 Biomarker disease BEFREE Expression of neural cell adhesion molecule (CD56) has been reported to correlate with an increased incidence of central nervous system involvement in peripheral T-cell lymphoma; all their cases were CD56 negative. 10976700 2000
Entrez Id: 943
Gene Symbol: TNFRSF8
TNFRSF8
0.100 AlteredExpression disease BEFREE Recently, several studies showed that the expression of these cytotoxic proteins in tumour cells of PTCL and NK-NHL is associated with a) extranodal site of clinicopathological presentation b) NK or Tgammadelta-cell phenotype c) CD30 expression in cutaneous T-cell lymphoproliferations and d) anaplastic morphology in nodal PTCL. 10830738 2000
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.080 Biomarker disease BEFREE We studied 14 cases that showed a morphologic appearance of peripheral T-cell lymphoma and contained substantial numbers of CD20+ large B cells. 10941339 2000
Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
0.080 Biomarker disease BEFREE CD20-Positive peripheral T-cell lymphoma: report of a case after nodular sclerosis Hodgkin's disease and review of the literature. 11106083 2000
Entrez Id: 54474
Gene Symbol: KRT20
KRT20
0.080 Biomarker disease BEFREE CD20-Positive peripheral T-cell lymphoma: report of a case after nodular sclerosis Hodgkin's disease and review of the literature. 11106083 2000
Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
0.080 Biomarker disease BEFREE We studied 14 cases that showed a morphologic appearance of peripheral T-cell lymphoma and contained substantial numbers of CD20+ large B cells. 10941339 2000
Entrez Id: 1021
Gene Symbol: CDK6
CDK6
0.020 AlteredExpression disease BEFREE In this study, we collected 47 cases of nasal lymphoma and investigated the phenotypic difference between NK/T-cell lymphoma and PTL by examining the pattern of the developmentally differentially expressed molecules cdk6 (cyclin-dependent kinase 6), CD44, CD117, and by examining the rearrangement of the T-cell receptor gene (TcR-GR). cdk6, an essential regulator of the cell cycle in G1 progression, was over-expressed in a subset of cortical thymocytes, but absent in mature thymocytes. 10879740 2000