Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 27319
Gene Symbol: BHLHE22
BHLHE22
0.010 Biomarker disease BEFREE Here, kinetics and thermodynamics of cyanide, thiocyanate and imidazole binding to ferric human Hb (Hb(III)), Hb(III) dimers complexed with the human Hp phenotypes 1-1 and 2-2 (Hp1-1:Hb(III) and Hp2-2:Hb(III), respectively), and α(III) and β(III) chains are reported and analyzed in parallel with fluoride and azide binding properties (at pH 7.0 and 20.0 °C). 31733428 2020
Entrez Id: 55270
Gene Symbol: NUDT15
NUDT15
0.010 Biomarker disease BEFREE Our data suggest that NUDT15 plays an important role in 6-MP treatment and the results should be confirmed in larger cohorts. 31635813 2020
Entrez Id: 1934
Gene Symbol: EEF1B2P2
EEF1B2P2
0.010 Biomarker disease BEFREE Here, kinetics and thermodynamics of cyanide, thiocyanate and imidazole binding to ferric human Hb (Hb(III)), Hb(III) dimers complexed with the human Hp phenotypes 1-1 and 2-2 (Hp1-1:Hb(III) and Hp2-2:Hb(III), respectively), and α(III) and β(III) chains are reported and analyzed in parallel with fluoride and azide binding properties (at pH 7.0 and 20.0 °C). 31733428 2020
Entrez Id: 116337
Gene Symbol: PANX3
PANX3
0.010 AlteredExpression disease BEFREE In stem cells from human exfoliated deciduous teeth (SHED), HP significantly promoted calcium deposition as well as the expression of odontogenic marker genes, PANX3 and DSPP, and WNT related-genes including WNT5b and WNT16, whereas HP inhibited cell proliferation and enhanced primary cilia expression. 31611621 2019
Entrez Id: 1233
Gene Symbol: CCR4
CCR4
0.010 AlteredExpression disease BEFREE In vitro, M. pneumoniae (MP) infection to A549 cells induced the expression of CCL5, chemokines receptor 4 (CCR4), nuclear factor-κB (NF-κB) nuclear protein, and phosphorylation of NF-κB-p65 (p-NF-κB-p65), whereas NF-κB cytoplasmic protein was decreased. 30350306 2019
Entrez Id: 1834
Gene Symbol: DSPP
DSPP
0.010 AlteredExpression disease BEFREE In stem cells from human exfoliated deciduous teeth (SHED), HP significantly promoted calcium deposition as well as the expression of odontogenic marker genes, PANX3 and DSPP, and WNT related-genes including WNT5b and WNT16, whereas HP inhibited cell proliferation and enhanced primary cilia expression. 31611621 2019
Entrez Id: 3068
Gene Symbol: HDGF
HDGF
0.010 AlteredExpression disease BEFREE Helicobacter pylori (Hp) infection and overexpression of hepatoma-derived growth factor (HDGF) are involved in gastric carcinogenesis. 31332288 2019
Entrez Id: 27
Gene Symbol: ABL2
ABL2
0.010 Biomarker disease BEFREE Our study suggests that Hp infection is not associated with elevated asymmetric dimethylation and citrullination of Arg proteins present in the serum or with the hArg synthesis from free Arg in elderly subjects. 31028565 2019
Entrez Id: 50943
Gene Symbol: FOXP3
FOXP3
0.010 Biomarker disease BEFREE Several studies have been conducted to investigate why most gastric MALT lymphomas remain localized, are dependent on HP infection, and show HP-specific intratumoral T-cells (e.g., CD40-mediated signaling, T-helper-2 (Th2)-type cytokines, chemokines, costimulatory molecules, and FOXP3+ regulatory T-cells) and their communication with B-cells. 30999581 2019
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.010 Biomarker disease BEFREE Taken together, these results indicate that PD treatment suppressed the inflammatory response and the development of pulmonary fibrosis by inhibiting the NLRP3 inflammasome and NF-κB pathway after MP infection. 30548648 2019
Entrez Id: 10801
Gene Symbol: SEPTIN9
SEPTIN9
0.010 Biomarker disease BEFREE Both SEPT9 and SDC2 were shown by ColoDefense to be heavily methylated in CRC tissues when compared to paired paracancerous tissues and HP (P < .01). 31407497 2019
Entrez Id: 406937
Gene Symbol: MIR145
MIR145
0.010 AlteredExpression disease BEFREE It can be concluded that, in the process of MP infection, the expression of miR-145 is stimulated to negatively regulate the fibrosis-promoting pathway of TGF-β/Smad. 31637903 2019
Entrez Id: 958
Gene Symbol: CD40
CD40
0.010 Biomarker disease BEFREE Several studies have been conducted to investigate why most gastric MALT lymphomas remain localized, are dependent on HP infection, and show HP-specific intratumoral T-cells (e.g., CD40-mediated signaling, T-helper-2 (Th2)-type cytokines, chemokines, costimulatory molecules, and FOXP3+ regulatory T-cells) and their communication with B-cells. 30999581 2019
Entrez Id: 10014
Gene Symbol: HDAC5
HDAC5
0.010 Biomarker disease BEFREE Histone deacetylase 5 (HDAC5) is involved in the regulation of inflammation, however, whether it associates with immunity against MP infection is not determined. 30738045 2019
Entrez Id: 5175
Gene Symbol: PECAM1
PECAM1
0.010 AlteredExpression disease BEFREE Our data showed that rhFGF21-HP significantly improved wound closure; promoted granulation, collagen deposition, and re-epithelialization; and enhanced the expression of CD31. 31166803 2019
Entrez Id: 6352
Gene Symbol: CCL5
CCL5
0.010 AlteredExpression disease BEFREE In vitro, M. pneumoniae (MP) infection to A549 cells induced the expression of CCL5, chemokines receptor 4 (CCR4), nuclear factor-κB (NF-κB) nuclear protein, and phosphorylation of NF-κB-p65 (p-NF-κB-p65), whereas NF-κB cytoplasmic protein was decreased. 30350306 2019
Entrez Id: 1361
Gene Symbol: CPB2
CPB2
0.010 AlteredExpression disease BEFREE Based on molecular subtypes, CPB2 and IL10 expression were significantly higher in triple negative (TN) as compared to hormonal positive (HP) carcinoma tissues of IBC. 29459177 2019
Entrez Id: 5133
Gene Symbol: PDCD1
PDCD1
0.010 Biomarker disease BEFREE Furthermore, the relationship between Helicobacter pylori (Hp) infection and PD-1 and PD-L1 was also evaluated. 31190978 2019
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.010 Biomarker disease BEFREE Besides, the levels of anti-inflammatory cytokines include IL-4 and IL-10 was significantly higher in MS patients infected with HP when compared with MS patients seronegative for HP infection. 31610314 2019
Entrez Id: 744
Gene Symbol: MPPED2
MPPED2
0.010 PosttranslationalModification disease BEFREE The linear mixed-effects modeling analysis found that a cumulative pattern of MPPED2 methylation changes from normal mucosa to hyperplastic polyp to adenoma, and to carcinoma (P < 0.001). 30846004 2019
Entrez Id: 473
Gene Symbol: RERE
RERE
0.010 Biomarker disease BEFREE Our study suggests that Hp infection is not associated with elevated asymmetric dimethylation and citrullination of Arg proteins present in the serum or with the hArg synthesis from free Arg in elderly subjects. 31028565 2019
Entrez Id: 2191
Gene Symbol: FAP
FAP
0.010 GeneticVariation disease BEFREE Therefore, the pedigree was diagnosed as an FAP family with a novel APC germline mutation which had different gastric phenotypes depending on the status of HP infection. 31529234 2019
Entrez Id: 4318
Gene Symbol: MMP9
MMP9
0.010 Biomarker disease BEFREE The present study demonstrated that MMP9 expression in pulp tissues, blood and saliva from children with pulpitis and Hp infection in the stomach was upregulated, while miR-204 expression was downregulated. miR-204 may affect inflammatory processes and other oral diseases in children with pulpitis and Hp infection via MMP9, and may be a potential marker for the detection of Hp infection in children with pulpitis. 31258660 2019
Entrez Id: 2152
Gene Symbol: F3
F3
0.010 AlteredExpression disease BEFREE This study investigated the impact of acute running or rest followed by standardized meal consumption on MP phenotypes and TF expression. 30889043 2019
Entrez Id: 406987
Gene Symbol: MIR204
MIR204
0.010 Biomarker disease BEFREE The present study demonstrated that MMP9 expression in pulp tissues, blood and saliva from children with pulpitis and Hp infection in the stomach was upregulated, while miR-204 expression was downregulated. miR-204 may affect inflammatory processes and other oral diseases in children with pulpitis and Hp infection via MMP9, and may be a potential marker for the detection of Hp infection in children with pulpitis. 31258660 2019