Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5291
Gene Symbol: PIK3CB
PIK3CB
0.020 AlteredExpression disease BEFREE <i>In vitro</i> cell experiments revealed that the PI3K activity was enhanced and the PI3K/Akt pathway was significantly activated after HP infection in tumor cells, thus promoting the proliferation of tumor cells (p<0.05) in a time-dependent manner. 30344716 2018
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.020 AlteredExpression disease BEFREE <i>In vitro</i> cell experiments revealed that the PI3K activity was enhanced and the PI3K/Akt pathway was significantly activated after HP infection in tumor cells, thus promoting the proliferation of tumor cells (p<0.05) in a time-dependent manner. 30344716 2018
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.020 AlteredExpression disease BEFREE <i>In vitro</i> cell experiments revealed that the PI3K activity was enhanced and the PI3K/Akt pathway was significantly activated after HP infection in tumor cells, thus promoting the proliferation of tumor cells (p<0.05) in a time-dependent manner. 30344716 2018
Entrez Id: 5293
Gene Symbol: PIK3CD
PIK3CD
0.020 AlteredExpression disease BEFREE <i>In vitro</i> cell experiments revealed that the PI3K activity was enhanced and the PI3K/Akt pathway was significantly activated after HP infection in tumor cells, thus promoting the proliferation of tumor cells (p<0.05) in a time-dependent manner. 30344716 2018
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.010 Biomarker disease BEFREE Hyperplastic polyps and serrated adenomas of the colorectum show mixed gastrointestinal differentiation, expressing both gastric (M1 or MUC5AC) and intestinal (MUC2) mucins. 10398112 1999
Entrez Id: 633
Gene Symbol: BGN
BGN
0.010 AlteredExpression disease BEFREE Hp infection is also associated with increased PGI levels. 10763942 2000
Entrez Id: 54858
Gene Symbol: PGPEP1
PGPEP1
0.010 AlteredExpression disease BEFREE Hp infection is also associated with increased PGI levels. 10763942 2000
Entrez Id: 2821
Gene Symbol: GPI
GPI
0.010 AlteredExpression disease BEFREE Hp infection is also associated with increased PGI levels. 10763942 2000
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.030 AlteredExpression disease BEFREE Hyperplastic polyps revealed absence of or weak bcl2 expression and strong p21 expression without topography. 11194193 2000
Entrez Id: 811
Gene Symbol: CALR
CALR
0.100 Biomarker disease BEFREE Hyperplastic polyps (HPs) share some histologic and molecular characteristics with SSA/P, but it is unclear whether SSA/Ps are derived from HPs or whether they develop by a different pathogenetic pathway. 21836485 2011
Entrez Id: 6737
Gene Symbol: TRIM21
TRIM21
0.100 Biomarker disease BEFREE Hyperplastic polyps (HPs) share some histologic and molecular characteristics with SSA/P, but it is unclear whether SSA/Ps are derived from HPs or whether they develop by a different pathogenetic pathway. 21836485 2011
Entrez Id: 51284
Gene Symbol: TLR7
TLR7
0.010 AlteredExpression disease BEFREE Hyperplastic polyps also showed increased TLR7 levels compared to the other polyp types. 22371291 2012
Entrez Id: 4582
Gene Symbol: MUC1
MUC1
0.030 GeneticVariation disease BEFREE HP infection is the most definite insult leading to GC, and a protective function of mucin 1 protein has been suggested by studies on Muc1 knocked-out mice. 24810688 2014
Entrez Id: 4313
Gene Symbol: MMP2
MMP2
0.010 AlteredExpression disease BEFREE MP significantly reduced the invasion of VEGFD-SK cells, tumor volume, lymphatic metastasis rates and lymphatic vessel density compared with control groups (P<0.05), accompanied with down-expression of VEGF-D and MMP-2 and increased apoptosis. 27211072 2016
Entrez Id: 3065
Gene Symbol: HDAC1
HDAC1
0.010 AlteredExpression disease BEFREE HP infection could promote HDAC1 and HDAC4 expression as determined by Western blotting. 28700998 2017
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.060 AlteredExpression disease BEFREE MP significantly decreased renal GSH levels, increased GPx activity, as well as downregulated the mRNA expression of TNF-α and BAX. 29319433 2018
Entrez Id: 581
Gene Symbol: BAX
BAX
0.010 AlteredExpression disease BEFREE MP significantly decreased renal GSH levels, increased GPx activity, as well as downregulated the mRNA expression of TNF-α and BAX. 29319433 2018
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.020 Biomarker disease BEFREE HP infection triggered the TGF-β1-induced EMT pathway and caused the emergence of GC stem cells, such as CD44v8-10. 30828872 2019
Entrez Id: 570
Gene Symbol: BAAT
BAAT
0.010 Biomarker disease BEFREE BAT-26 positivity was detected in 1 of 6 hyperplastic polyps (16.7%) and in 2 of 10 adenomas (20%) without malignant transformation. 10547536 1999
Entrez Id: 5742
Gene Symbol: PTGS1
PTGS1
0.020 Biomarker disease BEFREE Cyclooxygenase-1 immunoreactivity was very weak in all the hyperplastic polyps and serrated adenomas. 11584208 2001
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF mutations were found in 11 of 215 (5.1%) colorectal adenocarcinomas, 3 of 108 (2.8%) sporadic adenomas, 1 of 63 (1.6%) adenomas from familial adenomatous polyposis (FAP) patients, and 1 of 3 (33%) hyperplastic polyps. 12438234 2002
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF mutation was frequent in HPs (67%) and SSAs (81%), while KRAS mutation was infrequent (4% and 3%, respectively). 16879389 2006
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 Biomarker disease BEFREE BRAF, K-ras and BAT26 genes have the potential to be molecular markers for colorectal adenomas and HPs, and can be used as non-invasive screening markers for colorectal polyps. 16937524 2006
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF mutation was rare in adenomas (1/248 [0.4%]) but common in SSAs (78%), traditional serrated adenomas (66%), mixed polyps (57%), and microvesicular hyperplastic polyps (70%). 17101316 2006
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation disease BEFREE BRAF gene mutations in the colorectum have been associated with serrated adenomas and less frequently with hyperplastic polyps, villous adenomas, tubular adenomas, and carcinomas. 17696956 2007