Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1057518960
rs1057518960
GJA1
C 0.700 GeneticVariation CLINVAR

dbSNP: rs1364709483
rs1364709483
TBX2 ; TBX2-AS1
A 0.700 CausalMutation CLINVAR

dbSNP: rs1558027212
rs1558027212
TMCO1
G 0.700 GeneticVariation CLINVAR

dbSNP: rs587783446
rs587783446
CHD7
T 0.700 CausalMutation CLINVAR

dbSNP: rs121909574
rs121909574
TFAP2A ; TFAP2A-AS2
C 0.700 CausalMutation CLINVAR A clinical and molecular analysis of branchio-oculo-facial syndrome patients in Russia revealed new mutations in TFAP2A. 25590586

2015
dbSNP: rs793888541
rs793888541
TFAP2A ; TFAP2A-AS2
T 0.700 CausalMutation CLINVAR A clinical and molecular analysis of branchio-oculo-facial syndrome patients in Russia revealed new mutations in TFAP2A. 25590586

2015
dbSNP: rs17085106
rs17085106
LINC01899
0.800 GeneticVariation GWASCAT A genome-wide association study identifies a locus for nonsyndromic cleft lip with or without cleft palate on 8q24. 19656524

2009
dbSNP: rs17085106
rs17085106
LINC01899
0.800 GeneticVariation GWASDB A genome-wide association study identifies a locus for nonsyndromic cleft lip with or without cleft palate on 8q24. 19656524

2009
dbSNP: rs987525
rs987525
CCDC26
0.800 GeneticVariation GWASDB A genome-wide association study identifies a locus for nonsyndromic cleft lip with or without cleft palate on 8q24. 19656524

2009
dbSNP: rs987525
rs987525
CCDC26
0.800 GeneticVariation GWASCAT A genome-wide association study identifies a locus for nonsyndromic cleft lip with or without cleft palate on 8q24. 19656524

2009
dbSNP: rs12543318
rs12543318 		0.810 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs10863790
rs10863790 		0.800 GeneticVariation GWASCAT A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs10863790
rs10863790 		0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs2064163
rs2064163 		0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs481931
rs481931
ABCA4
0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs6072081
rs6072081
LOC102724968
0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs7017252
rs7017252
CCDC26
0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs7078160
rs7078160
SHTN1
0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs742071
rs742071
PAX7
0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs987525
rs987525
CCDC26
A 0.800 GeneticVariation GWASCAT A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs987525
rs987525
CCDC26
A 0.800 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs1044516
rs1044516
IRF6 ; C1orf74
0.700 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs10779526
rs10779526 		0.700 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs11119388
rs11119388
SYT14
0.700 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010
dbSNP: rs11696257
rs11696257
LOC102724968
0.700 GeneticVariation GWASDB A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4. 20436469

2010