Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10065172
rs10065172
0.010 GeneticVariation BEFREE In contrast, neither PTB nor STB were found to be associated with rs10065172 and rs11003125. 28867622

2017

dbSNP: rs1010
rs1010
0.010 GeneticVariation BEFREE This result suggests that rs1010 genotyping could be used as prognostic biomarker to predict the risk of Mtb infection and/or PTB disease development after Mtb infection in the Chinese Han population. 30945947

2019

dbSNP: rs10208770
rs10208770
0.010 GeneticVariation BEFREE Two of these SNPs were associated with pulmonary TB (rs10208770 and rs16826860) and one with extra-pulmonary TB (rs10498244). 25006821

2014

dbSNP: rs1041981
rs1041981
0.010 GeneticVariation BEFREE The TA haplotype was significantly over-represented (P=0.011) in the cases showing a two-fold risk in the current population (Odds ratio=1.59 CI=1.101 to 2.297) and TNFB variants at rs2229094 and rs1041981 contributed to two haplotypes which were in strong linkage disequilibrium (LD) with AT haplotype showing a three-fold risk (P=0.0011, Odds ratio=3, CI=0.1939 to 0.7445) of developing PTB in north Indians. 22771610

2012

dbSNP: rs10421768
rs10421768
0.010 GeneticVariation BEFREE Our findings indicate that the HAMP-P -582 A>G polymorphism (rs10421768) is associated with susceptibility to extrapulmonary TB, but not pulmonary TB. 28530443

2017

dbSNP: rs1042713
rs1042713
0.010 GeneticVariation BEFREE Genotype distributions of the rs1042713 (Arg16Gly +46A>G) and rs1042714 (Gln27Glu +79C>G) polymorphisms in ADRB2 gene in 106 patients with pulmonary tuberculosis and 88 healthy subjects were studied by PCR-RFLP method in an Iranian population. 27900465

2017

dbSNP: rs1042714
rs1042714
0.010 GeneticVariation BEFREE Genotype distributions of the rs1042713 (Arg16Gly +46A>G) and rs1042714 (Gln27Glu +79C>G) polymorphisms in ADRB2 gene in 106 patients with pulmonary tuberculosis and 88 healthy subjects were studied by PCR-RFLP method in an Iranian population. 27900465

2017

dbSNP: rs10498244
rs10498244
0.010 GeneticVariation BEFREE Two of these SNPs were associated with pulmonary TB (rs10208770 and rs16826860) and one with extra-pulmonary TB (rs10498244). 25006821

2014

dbSNP: rs10499859
rs10499859
0.010 GeneticVariation BEFREE These data showed that MARCO rs12998782 may increase PTB risk while two SNPs of CD36, rs1194182 and rs10499859 may reduce the risk, indicating MARCO and CD36 as important receptors in response to PTB. 28693442

2017

dbSNP: rs1050504
rs1050504
0.010 GeneticVariation BEFREE Only the rs1050504 C > T genotype was observed to be significantly associated with an increased risk for developing pulmonary TB (41.8% vs 27%, OR 1.95, 95% CI 1.16-3.27; p = 0.01). 29115933

2017

dbSNP: rs1057141
rs1057141
0.010 GeneticVariation BEFREE No significant association was found between TAP1 (rs1057141), TAP2 (rs2228396, rs67511411, rs141555015) variants and PTB. 26996113

2016

dbSNP: rs10759931
rs10759931
0.010 GeneticVariation BEFREE An MDR analysis of gene-gene and gene-environment interactions identified three SNPs (rs10759932, rs7873784, and rs10759931) that predicted LTBI with 84% accuracy (p = 0.0004) and three SNPs (rs3804100, rs1898830, and rs10759931) that predicted PTB with 80% accuracy (p = 0.0001). 25928077

2015

dbSNP: rs10759932
rs10759932
0.010 GeneticVariation BEFREE Genetic polymorphisms of rs10759932 and rs2737190 in TLR4 are significantly related to both COPD and PTB but with inverse effects. 31640653

2019

dbSNP: rs10841845
rs10841845
0.010 GeneticVariation BEFREE Our findings suggest that variations at rs10841845 and rs10841847 of CLEC4E genes are associated with increased individual protection against PTB. 31075410

2019

dbSNP: rs10841847
rs10841847
0.010 GeneticVariation BEFREE Our findings suggest that variations at rs10841845 and rs10841847 of CLEC4E genes are associated with increased individual protection against PTB. 31075410

2019

dbSNP: rs10995271
rs10995271
0.010 GeneticVariation BEFREE In this study, we identified an association with borderline significance (P = 0.0009433 and P = 0.029 after multiple testing by Bonferroni's correction) of SNP rs10995271 with PTB. 24365559

2014

dbSNP: rs11003125
rs11003125
0.020 GeneticVariation BEFREE However, the other genetic models of rs1800450 (A>B), rs7096206 (Y>X), and rs11003125 (H>L) MBL2 gene polymorphisms did not divulge any association with PTB susceptibility. 30666135

2019

dbSNP: rs11003125
rs11003125
0.020 GeneticVariation BEFREE In contrast, neither PTB nor STB were found to be associated with rs10065172 and rs11003125. 28867622

2017

dbSNP: rs11168287
rs11168287
VDR
0.010 GeneticVariation BEFREE The goal of this study was the identification of putative associations between five SNPs (rs11574143, rs7975232, rs11574079, rs3819545 and rs11168287) in VDR and susceptibility to PTB. 27595605

2016

dbSNP: rs11209026
rs11209026
0.010 GeneticVariation BEFREE Our results demonstrate that the reduced-function polymorphism 1142G → A encoded by IL23R influences the outcome of disease severity of active pulmonary TB in Tunisian patients. 22695161

2012

dbSNP: rs1135216
rs1135216
0.010 GeneticVariation BEFREE The rs1135216 G allele was associated with increased risk of PTB (OR=2.65, 95%CI=1.784-3.969, p<0.001). 26996113

2016

dbSNP: rs1135791
rs1135791
0.010 GeneticVariation BEFREE The <i>TNF-α</i> -238 A allele appeared a protective effect against STB, whereas the <i>SP110</i> SNPs (rs722555 and rs1135791) and <i>TNF-α</i> -308G>A (rs1800629) showed no association with susceptibility to PTB and STB patients in southern China. 29430075

2017

dbSNP: rs1136452
rs1136452
0.010 GeneticVariation BEFREE This polymorphism, when existing along with a non-redundant polymorphism, SP-A2G1649C (Ala91Pro) resulted in a stronger association with pulmonary tuberculosis (number of patients = 17, number of controls = 19, p = 0.000, OR = 16.3, 95% CI: 7.8644<OR<33.9244). 12476938

2002

dbSNP: rs11568350
rs11568350
0.010 GeneticVariation BEFREE There was significantly higher prevalence of pulmonary TB (P = 0.01) and Pneumocystis jiroveci pneumonia (P = 0.02) in subjects with ferroportin Q248H mutation. 22249207

2012

dbSNP: rs11574079
rs11574079
VDR
0.010 GeneticVariation BEFREE The goal of this study was the identification of putative associations between five SNPs (rs11574143, rs7975232, rs11574079, rs3819545 and rs11168287) in VDR and susceptibility to PTB. 27595605

2016