Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1004446
rs1004446
0.700 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011

dbSNP: rs10045431
rs10045431
0.710 GeneticVariation BEFREE Replication extended to the following polymorphisms: PKN2 (rs305217), GTF2B (rs7538427), EPHA4 (rs1517440), YTHDF3 (rs12115114), ANKFN1 (rs17758761) and PTPRM (rs4798571), which did not reach the threshold of significance in a follow-up of the first genome-wide association study (GWAS) conducted in multiple sclerosis; TMEM39A (rs1132200), which appeared as a newly identified susceptibility gene in the same study; a gene previously reaching GWAS significance in Italy, CBLB (rs9657904); IL12B (rs6887695, rs10045431), a susceptibility gene shared by diverse autoimmune diseases and, finally, another gene showing inconclusive association with multiple sclerosis, CNR1 (rs1049353). 22194214

2012

dbSNP: rs10045431
rs10045431
0.710 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011

dbSNP: rs1014486
rs1014486
G 0.700 GeneticVariation GWASCAT Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis. 24076602

2013

dbSNP: rs10201872
rs10201872
0.810 GeneticVariation BEFREE To confirm the association of this functional variant with MS and to compare it with the best-associated variant previously reported by GWAS (rs10201872), a case-control study including 4384 MS patients and 3197 controls was performed. 26152201

2015

dbSNP: rs10201872
rs10201872
A 0.810 GeneticVariation GWASCAT Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011

dbSNP: rs10201872
rs10201872
A 0.810 GeneticVariation GWASDB Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011

dbSNP: rs1021156
rs1021156
0.710 GeneticVariation BEFREE We identified 2 non-human leucocyte antigen (HLA; rs12599600 and rs1021156) and 1 HLA (rs9266773) SNP predicting both MS and relapse risk. 27559181

2016

dbSNP: rs1021156
rs1021156
A 0.710 GeneticVariation GWASCAT Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis. 24076602

2013

dbSNP: rs1024611
rs1024611
0.010 GeneticVariation BEFREE The purpose of this study was to examine whether the monocyte chemoattractant protein-1 (MCP-1) promoter -2518 A/G polymorphism (rs1024611) is associated with susceptibility to vasculitis, rheumatoid arthritis (RA), or multiple sclerosis (MS). 27064875

2016

dbSNP: rs1036207
rs1036207
C 0.700 GeneticVariation GWASCAT Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis. 24076602

2013

dbSNP: rs10411936
rs10411936
A 0.800 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011

dbSNP: rs10411936
rs10411936
A 0.800 GeneticVariation GWASCAT Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011

dbSNP: rs1044165
rs1044165
0.010 GeneticVariation BEFREE We performed an association study of polymorphous variants of MIR146A rs2910164, MIR196A2 rs11614913, MIR499A rs3746444 MIR223 rs1044165 and their combinations with MS risk and severity. 26305248

2015

dbSNP: rs10466829
rs10466829
A 0.800 GeneticVariation GWASDB Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011

dbSNP: rs10466829
rs10466829
A 0.800 GeneticVariation GWASCAT Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011

dbSNP: rs10488631
rs10488631
0.700 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011

dbSNP: rs104895080
rs104895080
0.010 GeneticVariation BEFREE Concurrent TNFRSF1A R92Q and pyrin E230K mutations in a child with multiple sclerosis. 20876156

2010

dbSNP: rs104895094
rs104895094
0.010 GeneticVariation BEFREE Frequencies of the pyrin E148Q and K695R mutations were not statistically different between MS group 2 and controls but they occurred with a surprisingly high frequency in the German population. 22337722

2012

dbSNP: rs104895271
rs104895271
0.010 GeneticVariation BEFREE We describe 3 families (8 subjects) with the TNFRSF1A D12E substitution and TRAPS-related symptoms, in 4 cases associated with the autoimmune diseases multiple sclerosis and rheumatoid arthritis. 23322460

2013

dbSNP: rs10492503
rs10492503
0.010 GeneticVariation BEFREE A significant correlation was observed in the presence of allele T of rs10492503 polymorphism inGPC5 gene with sex and age of MS onset. 30818222

2019

dbSNP: rs10492972
rs10492972
0.830 GeneticVariation BEFREE We applied the equivalence method to genetic data to confirm that an association between the KIF1B (kinesin family member1B) rs10492972 allele and multiple sclerosis (MS), reported in Nature Genetics in 2008, is present neither in eight data sets of cases and controls nor in three independent data sets of the International Multiple Sclerosis Genetic Consortium. 21594895

2011

dbSNP: rs10492972
rs10492972
C 0.830 GeneticVariation GWASCAT Genetic variation in the KIF1B locus influences susceptibility to multiple sclerosis. 18997785

2008

dbSNP: rs10492972
rs10492972
C 0.830 GeneticVariation GWASDB Genetic variation in the KIF1B locus influences susceptibility to multiple sclerosis. 18997785

2008

dbSNP: rs10492972
rs10492972
0.830 GeneticVariation BEFREE The objective of this study is to test the association of the rs10492972 C allelic variant of KIF1B gene in a large Italian cohort of patients with primary progressive and progressive relapsing MS (PPMS and PRMS), which represents a subtype of MS mainly driven by neurodegenerative phenomena. 20067515

2010