Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs11129295
rs11129295 		A 0.810 GeneticVariation GWASCAT Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs11129295
rs11129295 		0.810 GeneticVariation BEFREE We found that the frequency of T/T genotype was much higher in MS group (χ<sup>2</sup> = 10.251, P = 0.005) and the T allele of rs11129295 increased the risk of MS (χ<sup>2</sup> = 10.022, P = 0.002). 29521285

2018
dbSNP: rs11129295
rs11129295 		A 0.810 GeneticVariation GWASDB Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs17066096
rs17066096 		G 0.810 GeneticVariation GWASCAT Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs17066096
rs17066096 		0.810 GeneticVariation BEFREE We show that monocytes from carriers of the risk genotype of rs17066096 express more IL-22BP in vitro and cerebrospinal fluid levels of IL-22BP correlate with MS lesion load on magnetic resonance imaging. 31292217

2019
dbSNP: rs17066096
rs17066096 		G 0.810 GeneticVariation GWASCAT Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis. 24076602

2013
dbSNP: rs17066096
rs17066096 		G 0.810 GeneticVariation GWASDB Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs17445836
rs17445836 		0.810 GeneticVariation BEFREE In the recently published meta-analysis of multiple sclerosis genome-wide association studies De Jager et al. identified three single nucleotide polymorphisms associated to MS: rs17824933 (CD6), rs1800693 (TNFRSF1A) and rs17445836 (61.5 kb from IRF8). 21552549

2011
dbSNP: rs17445836
rs17445836 		G 0.810 GeneticVariation GWASDB Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. 19525953

2009
dbSNP: rs17445836
rs17445836 		G 0.810 GeneticVariation GWASCAT Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. 19525953

2009
dbSNP: rs2744148
rs2744148 		0.810 GeneticVariation BEFREE All five tested single nucleotide polymorphisms showed consistent and statistically significant evidence for association with multiple sclerosis in our validation data sets (rs228614: odds ratio = 0.91, P = 2.4 × 10(-6); rs630923: odds ratio = 0.89, P = 1.2 × 10(-4); rs2744148: odds ratio = 1.14, P = 1.8 × 10(-6); rs180515: odds ratio = 1.12, P = 5.2 × 10(-7); rs6062314: odds ratio = 0.90, P = 4.3 × 10(-3)). 23739915

2013
dbSNP: rs2744148
rs2744148 		G 0.810 GeneticVariation GWASDB Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs2744148
rs2744148 		G 0.810 GeneticVariation GWASCAT Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs6074022
rs6074022 		G 0.810 GeneticVariation GWASCAT Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20. 19525955

2009
dbSNP: rs6074022
rs6074022 		0.810 GeneticVariation BEFREE Two SNPs were significantly associated with MS: rs6074022 (additive model C allele OR = 1.27, 95% CI = [1.12-1.45], p = 3×10(-4)) and rs1883832 (additive model T allele OR = 1.20, 95% CI = [1.05-1.38], p = 7×10(-3)). 23613777

2013
dbSNP: rs6074022
rs6074022 		G 0.810 GeneticVariation GWASDB Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20. 19525955

2009
dbSNP: rs9271640
rs9271640 		0.810 GeneticVariation BEFREE There are eQTLs in linkage with lead MS variants in 25 genes including the multitissue eQTL, rs9271640, for <i>HLA-DRB1</i>/<i>DRB5</i>. 31482761

2019
dbSNP: rs9271640
rs9271640 		0.810 GeneticVariation GWASCAT Oligoclonal band status in Scandinavian multiple sclerosis patients is associated with specific genetic risk alleles. 23472185

2013
dbSNP: rs9271640
rs9271640 		A 0.810 GeneticVariation GWASCAT Genetic variants are major determinants of CSF antibody levels in multiple sclerosis. 25616667

2015
dbSNP: rs9271640
rs9271640 		G 0.810 GeneticVariation GWASCAT Genetic variants are major determinants of CSF antibody levels in multiple sclerosis. 25616667

2015
dbSNP: rs9271640
rs9271640 		0.810 GeneticVariation GWASDB Oligoclonal band status in Scandinavian multiple sclerosis patients is associated with specific genetic risk alleles. 23472185

2013
dbSNP: rs10866713
rs10866713 		A 0.800 GeneticVariation GWASCAT Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011
dbSNP: rs10866713
rs10866713 		A 0.800 GeneticVariation GWASDB Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. 22190364

2011
dbSNP: rs12048904
rs12048904 		A 0.800 GeneticVariation GWASDB Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011
dbSNP: rs12048904
rs12048904 		A 0.800 GeneticVariation GWASCAT Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. 21833088

2011