SLC6A4, solute carrier family 6 member 4, 6532

N. diseases: 440; N. variants: 28
Source: ALL
Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0178417
Disease:
Anhedonia
0.010 GeneticVariation BEFREE Although preliminary, these findings identify anhedonia as a promising mechanism linking 5-HTTLPR/rs25531 genotype and stress to depression. 22094432 2012
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011581
Disease:
Depressive disorder
0.100 GeneticVariation BEFREE Although preliminary, these findings identify anhedonia as a promising mechanism linking 5-HTTLPR/rs25531 genotype and stress to depression. 22094432 2012
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0344315
Disease:
Depressed mood
0.100 GeneticVariation BEFREE Although preliminary, these findings identify anhedonia as a promising mechanism linking 5-HTTLPR/rs25531 genotype and stress to depression. 22094432 2012
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011570
Disease:
Mental Depression
0.100 GeneticVariation BEFREE Although preliminary, these findings identify anhedonia as a promising mechanism linking 5-HTTLPR/rs25531 genotype and stress to depression. 22094432 2012
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0022104
Disease:
Irritable Bowel Syndrome
0.010 GeneticVariation BEFREE Carriers of the rare G allele of rs25531 had approximately threefold increased odds of irritable bowel syndrome compared with healthy controls (OR 3.3, 95% CI 1.1-9.6). 19125330 2009
dbSNP: rs25532
rs25532
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0344315
Disease:
Depressed mood
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs25532
rs25532
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011570
Disease:
Mental Depression
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs25532
rs25532
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011581
Disease:
Depressive disorder
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs1042173
rs1042173
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0011570
Disease:
Mental Depression
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs1042173
rs1042173
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0344315
Disease:
Depressed mood
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs1042173
rs1042173
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0011581
Disease:
Depressive disorder
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs1042173
rs1042173
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0030193
Disease:
Pain
0.010 GeneticVariation BEFREE Cognitive status, age, and depression were directly associated with successful aging; variance in rs25532 or rs1042173, resilience, and pain were indirectly associated with successful aging through depression. 25818147 2015
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0001973
Disease:
Alcoholic Intoxication, Chronic
0.020 GeneticVariation BEFREE Comparing AD and control populations and taking into account statistical correction for multiple testing, we found no statistically significant differences for 5-HTTLPR (L/S) and rs25531 polymorphisms in terms of either genotypes or alleles frequencies. 25770138 2015
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0233514
Disease:
Abnormal behavior
0.050 GeneticVariation BEFREE Comparing the genotypic and allelic frequencies of AD without and with BPSD, we did not find a difference for the 5-HTTLPR or the rs25531, even after stratification according to single SBI-BP item. 19625753 2009
dbSNP: rs1042173
rs1042173
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0028043
Disease:
Nicotine Dependence
0.010 GeneticVariation BEFREE Considering biological functions of the three genes, we examined interactive effects of variants in the three genes, which revealed significant interactions among rs1062613 and rs10160548 in HTR3A, rs1176744 in HTR3B, and 5-HTTLPR and rs1042173 in SLC6A4 in affecting ND in the three samples. 23290502 2013
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0815107
Disease:
psychological distress
0.020 GeneticVariation BEFREE Findings suggest that 5-HTTLPR/rs25531 genotype is associated with psychological distress in a sample of subjects with diabetes. 22921508 2012
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011847
Disease:
Diabetes
0.010 GeneticVariation BEFREE Findings suggest that 5-HTTLPR/rs25531 genotype is associated with psychological distress in a sample of subjects with diabetes. 22921508 2012
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011849
Disease:
Diabetes Mellitus
0.010 GeneticVariation BEFREE Findings suggest that 5-HTTLPR/rs25531 genotype is associated with psychological distress in a sample of subjects with diabetes. 22921508 2012
dbSNP: rs2054847
rs2054847
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE Further haplotype-based analyses revealed that a two-SNP haplotype, rs2054847-rs140701 (TG) in gene SLC6A4, was significantly associated with SZ (P-value = 1.63×10(-4) and corrected P-value = 0.002799). 26408209 2015
dbSNP: rs140701
rs140701
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0036341
Disease:
Schizophrenia
0.010 GeneticVariation BEFREE Further haplotype-based analyses revealed that a two-SNP haplotype, rs2054847-rs140701 (TG) in gene SLC6A4, was significantly associated with SZ (P-value = 1.63×10(-4) and corrected P-value = 0.002799). 26408209 2015
dbSNP: rs140701
rs140701
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0678222
Disease:
Breast Carcinoma
0.010 GeneticVariation BEFREE Furthermore, SNPs of the genes that contribute to alcohol behavior, DRD3 (rs167770), DRD2 (rs10891556), and SLC6A4 (rs140701), were also associated with an increased risk of breast cancer. 20180013 2010
dbSNP: rs140701
rs140701
Entrez Id: 6532
Gene Symbol: SLC6A4
SLC6A4
CUI: C0006142
Disease:
Malignant neoplasm of breast
0.010 GeneticVariation BEFREE Furthermore, SNPs of the genes that contribute to alcohol behavior, DRD3 (rs167770), DRD2 (rs10891556), and SLC6A4 (rs140701), were also associated with an increased risk of breast cancer. 20180013 2010
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C1842981
Disease:
NEUROTICISM
0.020 GeneticVariation BEFREE Gender-specific association between serotonin transporter polymorphisms (5-HTTLPR and rs25531) and neuroticism, anxiety and depression in well-defined healthy Han Chinese. 27788383 2017
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011570
Disease:
Mental Depression
0.100 GeneticVariation BEFREE Gender-specific association between serotonin transporter polymorphisms (5-HTTLPR and rs25531) and neuroticism, anxiety and depression in well-defined healthy Han Chinese. 27788383 2017
dbSNP: rs25531
rs25531
Entrez Id: 6532;105371720
Gene Symbol: SLC6A4;LOC105371720
SLC6A4;LOC105371720
CUI: C0011581
Disease:
Depressive disorder
0.100 GeneticVariation BEFREE Gender-specific association between serotonin transporter polymorphisms (5-HTTLPR and rs25531) and neuroticism, anxiety and depression in well-defined healthy Han Chinese. 27788383 2017